RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 LRIG1Q96JA1 1093 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 PPP1R13BQ96KQ4 1090 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 SIX2Q9NPC8 291 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 ANLNQ9NQW6 1124 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 APEX2Q9UBZ4 518 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 SLC12A6Q9UHW9 1150 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 VANGL2Q9ULK5 521 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 DMTF1Q9Y222 760 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 HS3ST2Q9Y278 367 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 TBC1D30Q9Y2I9 924 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 HS3ST4Q9Y661 456 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 LOC400499M0QZD8 3231 aa9.94□□□□□ -0.82
CFTRP3-201ENST00000376400 SYNJ2BP-COX16A0A087WUM0 186 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 RNF103O00237 685 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 TLX3O43711 291 aaPredicted RBP9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PAGE1O75459 146 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 DAB1O75553 588 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 ECEL1O95672 775 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 MT-CO1P00395 513 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 CTSLP07711 333 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 CDK4P11802 303 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 TFE3P19532 575 aaPredicted RBP9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PON1P27169 355 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 NUDT1P36639 197 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 OVGP1Q12889 678 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 DLG2Q15700 870 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 ARHGAP44Q17R89 818 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 POM121L1PQ3SYA9 428 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PTPN20Q4JDL3 420 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 SLC45A4Q5BKX6 768 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 EFHC1Q5JVL4 640 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PIP5KL1Q5T9C9 394 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 HES3Q5TGS1 186 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 BEND4Q6ZU67 534 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 C11orf57Q6ZUT1 292 aaPredicted RBP9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 SLC26A9Q7LBE3 791 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 DSG4Q86SJ6 1040 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PRPF39Q86UA1 669 aaKnown RBP9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 TRIM42Q8IWZ5 723 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 OXR1Q8N573 874 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 C1orf131Q8NDD1 294 aaKnown RBP9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 ZNF397Q8NF99 534 aaPredicted RBP9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PIP4K2CQ8TBX8 421 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 NXPE2Q96DL1 559 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 FAM81BQ96LP2 452 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 PSMB7Q99436 277 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 NPY6RQ99463 290 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 COX16Q9P0S2 106 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 SLC25A13Q9UJS0 675 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 CA5BQ9Y2D0 317 aa9.93□□□□□ -0.82
CFTRP3-201ENST00000376400 SMG1Q96Q15 3661 aaKnown RBP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 GTPBP10A4D1E9 387 aaKnown RBP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 TRIM38O00635 465 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 SNAP91O60641 907 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 SDC3O75056 442 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 CLDN11O75508 207 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 CNTN5O94779 1100 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 PNMA6AP0CW24 399 aaPredicted RBP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 SRCP12931 536 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 JUPP14923 745 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 CKMT2P17540 419 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ITPKBP27987 946 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 HNF1BP35680 557 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 USP8P40818 1118 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 CDH4P55283 916 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 SLC6A3Q01959 620 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 TARDBPQ13148 414 aaKnown RBP eCLIP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 NME3Q13232 169 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 MTA1Q13330 715 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ZNF177Q13360 481 aaPredicted RBP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ILKQ13418 452 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 RTP5Q14D33 572 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ACCSLQ4AC99 568 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 SETMARQ53H47 684 aaPredicted RBP9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ALFQ53S48 1182 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 FAM46CQ5VWP2 391 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 DPY19L2P1Q6NXN4 242 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 GBP6Q6ZN66 633 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 SLC25A45Q8N413 288 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 OR2A12Q8NGT7 310 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 RFFLQ8WZ73 363 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 RNF34Q969K3 372 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 PPP1R9BQ96SB3 815 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 C7orf69Q9H7B7 122 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 CAAP1Q9H8G2 361 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 PREBQ9HCU5 417 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 PIGVQ9NUD9 493 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 ARHGEF38Q9NXL2 777 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 RWDD2AQ9UIY3 292 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 VPS28Q9UK41 221 aa9.92□□□□□ -0.82
CFTRP3-201ENST00000376400 HMX2A2RU54 273 aa9.91□□□□□ -0.82
CFTRP3-201ENST00000376400 C1QTNF3-AMACRE9PGA6 284 aa9.91□□□□□ -0.82
CFTRP3-201ENST00000376400 PRAMEF26H0Y7S4 382 aa9.91□□□□□ -0.82
CFTRP3-201ENST00000376400 K7ERQ8 282 aa9.91□□□□□ -0.82
CFTRP3-201ENST00000376400 M0QYT0 321 aa9.91□□□□□ -0.82
CFTRP3-201ENST00000376400 SMAD6O43541 496 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms