RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 NDRG1Q92597 394 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 MFSD3Q96ES6 412 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 EGFL7Q9UHF1 273 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SYNDIG1LA6NDD5 238 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 CXorf49A8MYA2 514 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 RGS5O15539 181 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 ADCY6O43306 1168 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 EGFRP00533 1210 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 EIF2B2P49770 351 aaKnown RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 SCNN1GP51170 649 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 TTC23Q5W5X9 447 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 BBS7Q8IWZ6 715 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 LGI2Q8N0V4 545 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 GALNT15Q8N3T1 639 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 NXNL1Q96CM4 212 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 TBCDQ9BTW9 1192 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 GATA5Q9BWX5 397 aaPredicted RBP17.55■□□□□ 0.4
PTPRU-202ENST00000373779 INVSQ9Y283 1065 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 TRPV2Q9Y5S1 764 aa17.55■□□□□ 0.4
PTPRU-202ENST00000373779 RALGDSQ12967 914 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 KLF1Q13351 362 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-202ENST00000373779 RHBDF2Q6PJF5 856 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 GLOD4Q9HC38 313 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 HMG20AQ9NP66 347 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 VWA7Q9Y334 891 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 LRRC42Q9Y546 428 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 ATG7O95352 703 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 MLYCDO95822 493 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 HOXD10P28358 340 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 HALP42357 657 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 GPD2P43304 727 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 POLD2P49005 469 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 SLC18A2Q05940 514 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 HIST2H2ACQ16777 129 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-202ENST00000373779 HIST2H2AA3Q6FI13 130 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 PGLYRP2Q96PD5 576 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 PRDM5Q9NQX1 630 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-202ENST00000373779 AAASQ9NRG9 546 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 DYTNA2CJ06 578 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 KCNU1A8MYU2 1149 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 KPNA6O60684 536 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 JAG1P78504 1218 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 DDR2Q16832 855 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 GPR107Q5VW38 600 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 ADHFE1Q8IWW8 467 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 TMEM132CQ8N3T6 1108 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 PLEKHG4BQ96PX9 1271 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 UBA2Q9UBT2 640 aaPredicted RBP17.54■□□□□ 0.4
PTPRU-202ENST00000373779 COL1A2P08123 1366 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 TSPAN3O60637 253 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 GPC2Q8N158 579 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 MPP5Q8N3R9 675 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 SFRP1Q8N474 314 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 KLRG1Q96E93 195 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 CIB1Q99828 191 aa17.54■□□□□ 0.4
PTPRU-202ENST00000373779 TNPO3Q9Y5L0 923 aaKnown RBP17.54■□□□□ 0.4
PTPRU-202ENST00000373779 TYROBPO43914 113 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 IDO1P14902 403 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 TOP3AQ13472 1001 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 OTOP3Q7RTS5 596 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 RAB42Q8N4Z0 105 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 CDCA5Q96FF9 252 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 CDK5RAP1Q96SZ6 601 aaKnown RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 HOPXQ9BPY8 73 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 TIMMDC1Q9NPL8 285 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 DYRK4Q9NR20 520 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 DTLQ9NZJ0 730 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 CNOT3O75175 753 aaKnown RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 IPO13O94829 963 aaKnown RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 MBL2P11226 248 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 ADSLP30566 484 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 WNT3AP56704 352 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 NAA20P61599 178 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 ITGADQ13349 1161 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 SATL1Q86VE3 508 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 FAM228AQ86W67 206 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 TRPM5Q9NZQ8 1165 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 AP3M1Q9Y2T2 418 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 TEX264Q9Y6I9 313 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 SERPIND1P05546 499 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 LINC00032P0C843 101 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 RAP1GDS1P52306 607 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 CNPY1Q3B7I2 92 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 ENDOVQ8N8Q3 282 aaKnown RBP17.53■□□□□ 0.4
PTPRU-202ENST00000373779 ATAD3AQ9NVI7 634 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 HMGXB4Q9UGU5 601 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 A0A0J9YYE9 177 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 PPIL2Q13356 520 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 CPA4Q9UI42 421 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 CDH13P55290 713 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 PPP1R15BQ5SWA1 713 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 LPGAT1Q92604 370 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 HDAC10Q969S8 669 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 SPATA17Q96L03 361 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 ZYG11BQ9C0D3 744 aa17.53■□□□□ 0.4
PTPRU-202ENST00000373779 TMCO1Q9UM00 188 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms