RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SUOXP51687 545 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 NEK3P51956 506 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 POLR2LP62875 67 aaKnown RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 DSC2Q02487 901 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 SNX1Q13596 522 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 MAP7D1Q3KQU3 841 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ANKRD20A2Q5SQ80 823 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ANKRD20A1Q5TYW2 823 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ANKRD20A3Q5VUR7 823 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 FBXL19Q6PCT2 694 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 SLC36A4Q6YBV0 504 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ERN2Q76MJ5 926 aaKnown RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CAMK1DQ8IU85 385 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 FAM71DQ8N9W8 422 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 GANCQ8TET4 914 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 GAB3Q8WWW8 586 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 RAB7BQ96AH8 199 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ECHDC3Q96DC8 303 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 KLHL32Q96NJ5 620 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 FCRL5Q96RD9 977 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 AP1M1Q9BXS5 423 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 BTBD1Q9H0C5 482 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 VPS45Q9NRW7 570 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CYP8B1Q9UNU6 501 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 IGHV1OR15-9A0A0B4J2B8 117 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 C16orf96A6NNT2 1141 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 HTRA2O43464 458 aaPredicted RBP15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 LILRB5O75023 590 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 GJB3O75712 270 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 RPP40O75818 363 aaKnown RBP15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 CD68P34810 354 aaPredicted RBP15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 ACTN2P35609 894 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 PTPN5P54829 565 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 NIPAL4Q0D2K0 466 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 PRSS33Q8NF86 280 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 ATL2Q8NHH9 583 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 MAGOHBQ96A72 148 aaKnown RBP15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 ARRDC3Q96B67 414 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 CAPZA3Q96KX2 299 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 GBA3Q9H227 469 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 NEUROG2Q9H2A3 272 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 KDM4CQ9H3R0 1056 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 RSPH14Q9UHP6 348 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 FEZ2Q9UHY8 353 aaPredicted RBP15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 HCN4Q9Y3Q4 1203 aa15.69■□□□□ 0.1
PRPF38B-202ENST00000370022 TTC24A2A3L6 582 aaPredicted RBP15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 PHF2O75151 1096 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 ADRB3P13945 408 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 NFKB1P19838 968 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 NFKBIAP25963 317 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 CD86P42081 329 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 FNTAP49354 379 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 METAP1P53582 386 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 GDF10P55107 478 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 SKOR1P84550 965 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 CNTN1Q12860 1018 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 TCF15Q12870 199 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 PRPSAP1Q14558 356 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 POM121L1PQ3SYA9 428 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 AGBL4Q5VU57 503 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 C4orf22Q6V702 233 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 ARHGEF18Q6ZSZ5 1173 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 PAF1Q8N7H5 531 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 CCDC89Q8N998 374 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 RLN3Q8WXF3 142 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 TADA1Q96BN2 335 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 TDRD1Q9BXT4 1180 aaKnown RBP15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 PCED1AQ9H1Q7 454 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 WSB2Q9NYS7 404 aaPredicted RBP15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 SMARCAL1Q9NZC9 954 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 SERGEFQ9UGK8 458 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 ARIH1Q9Y4X5 557 aaPredicted RBP15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 PCDHGC4Q9Y5F7 938 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 RAI2Q9Y5P3 530 aa15.68■□□□□ 0.1
PRPF38B-202ENST00000370022 H0Y858 1186 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 CCDC188H7C350 402 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 PLRG1O43660 514 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 ANXA9O76027 345 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 MMP2P08253 660 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 RPL26P61254 145 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 TRAF2Q12933 501 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 TUBB2AQ13885 445 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 UGP2Q16851 508 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 PARP6Q2NL67 630 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 SPDYCQ5MJ68 293 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 PIP5KL1Q5T9C9 394 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 ARMC12Q5T9G4 340 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 CCDC137Q6PK04 289 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 TTC7BQ86TV6 843 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 PRPF39Q86UA1 669 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 NDUFAF2Q8N183 169 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 KIF18AQ8NI77 898 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 CCDC110Q8TBZ0 833 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 GRK7Q8WTQ7 553 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 TOE1Q96GM8 510 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms