RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DUOX1Q9NRD9 1551 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 SERPIND1P05546 499 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 ADSLP30566 484 aaPredicted RBP14.06□□□□□ -0.16
SMC5-201ENST00000361138 TUBP50607 506 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 OXCT1P55809 520 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 CMPK2Q5EBM0 449 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 CLYBLQ8N0X4 340 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 SERHL2Q9H4I8 314 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 SERHLQ9NQF3 203 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 TRIM17Q9Y577 477 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 SNX8Q9Y5X2 465 aa14.06□□□□□ -0.16
SMC5-201ENST00000361138 ATP6AP2A0A1C7CYW4 349 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 FAM220BPB1ANY3 271 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ATP6AP2O75787 350 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 MLYCDO95822 493 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 TRAP1Q12931 704 aaKnown RBP14.05□□□□□ -0.16
SMC5-201ENST00000361138 CTBP1Q13363 440 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 FAM187BQ17R55 369 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 NAT8LQ8N9F0 302 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ZNF221Q9UK13 617 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 H3BSA7 217 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 AZIN1O14977 448 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 LYPLA2O95372 231 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 C2P06681 752 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 CTSHP09668 335 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 RPS9P46781 194 aaKnown RBP14.05□□□□□ -0.16
SMC5-201ENST00000361138 ITGA1P56199 1179 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ARHGEF7Q14155 803 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 RFX4Q33E94 735 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 CCNYL2Q5T2Q4 361 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 TLDC1Q6P9B6 456 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 PLD5Q8N7P1 536 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ADGRE3Q9BY15 652 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 TMEM216Q9P0N5 145 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 GMEB1Q9Y692 573 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 CETPP11597 493 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 S100A3P33764 101 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ADAM17P78536 824 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 MGAT5BQ3V5L5 792 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 FBXO16Q8IX29 292 aaPredicted RBP14.05□□□□□ -0.16
SMC5-201ENST00000361138 RAB42Q8N4Z0 105 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 MCFD2Q8NI22 146 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 CENPNQ96H22 339 aaPredicted RBP14.05□□□□□ -0.16
SMC5-201ENST00000361138 IKZF3Q9UKT9 509 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
SMC5-201ENST00000361138 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
SMC5-201ENST00000361138 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.163e-6■■■■□ 24.8
SMC5-201ENST00000361138 RHOJQ9H4E5 214 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 MTHFRP42898 656 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 SLC9B1Q4ZJI4 515 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 KLHL12Q53G59 568 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 P2RY11Q96G91 374 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 ADI1Q9BV57 179 aa14.05□□□□□ -0.16
SMC5-201ENST00000361138 KIF13AQ9H1H9 1805 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 FAM149AA5PLN7 773 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 COL6A2P12110 1019 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 CAPGP40121 348 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 QPRTQ15274 297 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 SLC4A11Q8NBS3 891 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 AGBL3Q8NEM8 1001 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 PNPT1Q8TCS8 783 aaKnown RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 REXO5Q96IC2 774 aaKnown RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 CNOT6Q9ULM6 557 aaKnown RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 CLDN25C9JDP6 229 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 KLF11O14901 512 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 CCNKO75909 580 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 TSPAN19P0C672 248 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 HALP42357 657 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 FCHO2Q0JRZ9 810 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 SKA1Q96BD8 255 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 SLC4A9Q96Q91 983 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 KRCC1Q9NPI7 259 aaPredicted RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 RPRD1BQ9NQG5 326 aaKnown RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 SPATA2Q9UM82 520 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 PIPSLA2A3N6 862 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 UGT2B11O75310 529 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 ITGALP20701 1170 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 NUMBP49757 651 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 ARL13AQ5H913 290 aaPredicted RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 ELMOD1Q8N336 334 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 TADA1Q96BN2 335 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 HSPBAP1Q96EW2 488 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 DEFB129Q9H1M3 183 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 GNPTGQ9UJJ9 305 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 SF3B1O75533 1304 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMC5-201ENST00000361138 GNG14A0A1W2PPG7 69 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 AREL1O15033 823 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 TNFRSF21O75509 655 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 GCATO75600 419 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 EPN2O95208 641 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 ITGB5P18084 799 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 POLD2P49005 469 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms