RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 ARL15Q9NXU5 204 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 FFAR3O14843 346 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 EPHB6O15197 1021 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 TP73O15350 636 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 GPR42O15529 346 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 WFS1O76024 890 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 SP100P23497 879 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 CDK7P50613 346 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 EPS8Q12929 822 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 TRIM32Q13049 653 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 GPR142Q7Z601 462 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 HAS1Q92839 578 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 ACO2Q99798 780 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 OSBPL6Q9BZF3 934 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 TRAV19A0A0A6YYK7 116 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ZBTB14O43829 449 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CCDC166P0CW27 439 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 NELFEP18615 380 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 GRIA4P48058 902 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 SUSD6Q92537 303 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PROX1Q92786 737 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ASB2Q96Q27 587 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ZFYVE1Q9HBF4 777 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 DNMT3LQ9UJW3 386 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ZW10O43264 779 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 LYPLA1O75608 230 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PIK3CGP48736 1102 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 HIRAP54198 1017 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PTSQ03393 145 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 MAP2K5Q13163 448 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CCNIQ14094 377 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 LLGL2Q6P1M3 1020 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 FBXL19Q6PCT2 694 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PSTKQ8IV42 348 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 AMER2Q8N7J2 671 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ASTN1O14525 1302 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 AVILO75366 819 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 NTRK1P04629 796 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CYP1A2P05177 515 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PRKAG1P54619 331 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 DENND5AQ6IQ26 1287 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ZC3H7AQ8IWR0 971 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 MSL3Q8N5Y2 521 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 TMEM161BQ8NDZ6 487 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 SKA1Q96BD8 255 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 MECRQ9BV79 373 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ZNF222Q9UK12 451 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ING4Q9UNL4 249 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PCDHGA3Q9Y5H0 932 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 STON1Q9Y6Q2 735 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 FER1L4A9Z1Z3 1794 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 OR6B1O95007 311 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 TRUB2O95900 331 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ZNF143P52747 638 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 HECTD3Q5T447 861 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ABRAXAS1Q6UWZ7 409 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 RNF44Q7L0R7 432 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 C16orf62Q7Z3J2 963 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CERS5Q8N5B7 392 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 ALLCQ8N6M5 410 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 PURBQ96QR8 312 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 REEP1Q9H902 201 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CRNNQ9UBG3 495 aaPredicted RBP12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 NDOR1Q9UHB4 597 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CARD8Q9Y2G2 431 aa12.3□□□□□ -0.44
CCDC144A-204ENST00000360524 CHADO15335 359 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 ENO2P09104 434 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 DGKAP23743 735 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 ADSSP30520 456 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 CCR4P51679 360 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 ADAM17P78536 824 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 CAPSQ13938 189 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 AP5B1Q2VPB7 878 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 PCID2Q5JVF3 399 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 RAP1GAP2Q684P5 730 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 POMGNT2Q8NAT1 580 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 HSFY1Q96LI6 401 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 SLC9A3R1O14745 358 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 IDH2P48735 452 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 ZC3H12AQ5D1E8 599 aaKnown RBP12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 UNC5AQ6ZN44 842 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 MAGEC3Q8TD91 643 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 C2orf49Q9BVC5 232 aaPredicted RBP12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 KIFC1Q9BW19 673 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 PNPLA3Q9NST1 481 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 AP4B1Q9Y6B7 739 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 H3BMM5 538 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 PGK1P00558 417 aa12.29□□□□□ -0.44
CCDC144A-204ENST00000360524 HLA-DQA2P01906 255 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms