RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 PJA1Q8NG27 643 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 CALML6Q8TD86 181 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 KIF12Q96FN5 646 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SLC39A13Q96H72 371 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 UROC1Q96N76 676 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SLC25A23Q9BV35 468 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 UPF3AQ9H1J1 476 aaKnown RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 TXNRD2Q9NNW7 524 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 ANLNQ9NQW6 1124 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SLC38A7Q9NVC3 462 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 POLR3BQ9NW08 1133 aaPredicted RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 USE1Q9NZ43 259 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SNX9Q9Y5X1 595 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 AP4B1Q9Y6B7 739 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 STX16-NPEPL1H3BU86 382 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 EEF2KO00418 725 aaKnown RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 STX16O14662 325 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 ACOX3O15254 700 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 RBP1P09455 135 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SRGAP2CP0DJJ0 459 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SRGAP2BP0DMP2 458 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 FCGR1AP12314 374 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 GNL1P36915 607 aaPredicted RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 CLCN3P51790 818 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 MS4A2Q01362 244 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SAMD4BQ5PRF9 694 aaKnown RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 TRIM68Q6AZZ1 485 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 CD300LGQ6UXG3 332 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 STRA8Q7Z7C7 330 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SHKBP1Q8TBC3 707 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 TRPM4Q8TD43 1214 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 TSPAN17Q96FV3 270 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 IMP4Q96G21 291 aaKnown RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 MYRFLQ96LU7 910 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 CATSPER2Q96P56 530 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 WDR41Q9HAD4 459 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 SDR39U1Q9NRG7 319 aaPredicted RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 DDX18Q9NVP1 670 aaKnown RBP8.87□□□□□ -0.99
CPNE8-201ENST00000331366 ZDHHC2Q9UIJ5 367 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 APPL1Q9UKG1 709 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 AP3M1Q9Y2T2 418 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 VWA7Q9Y334 891 aa8.87□□□□□ -0.99
CPNE8-201ENST00000331366 PLXNA2O75051 1894 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ARNTLO00327 626 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 TNFRSF10BO14763 440 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ZNF623O75123 536 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 HOXB9P17482 250 aaPredicted RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 TYMPP19971 482 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 TYK2P29597 1187 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 GRIA4P48058 902 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 SULT1E1P49888 294 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 SCNN1GP51170 649 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ADARB1P78563 741 aaKnown RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 IFRD2Q12894 506 aaPredicted RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 PRKG1Q13976 671 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 MAP7Q14244 749 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 MYLK3Q32MK0 819 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 PDCD4Q53EL6 469 aaKnown RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 AGMOQ6ZNB7 445 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 RIMKLAQ8IXN7 391 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ZNF599Q96NL3 588 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 APOL6Q9BWW8 343 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 B3GNT5Q9BYG0 378 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 RMI1Q9H9A7 625 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 TUBGCP4Q9UGJ1 667 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 LTBP2Q14767 1821 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 CCDC162PA2VCL2 907 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 DRGXA6NNA5 263 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 INO80B-WBP1J3KQ70 363 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 VAPBO95292 243 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 CDK4P11802 303 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ERCC2P18074 760 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 CCT8P50990 548 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 EEFSECP57772 596 aaKnown RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 LILRA4P59901 499 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 KDSRQ06136 332 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 MMEL1Q495T6 779 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 ZBED5Q49AG3 693 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 SPATA19Q7Z5L4 167 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 PIGZQ86VD9 579 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 C12orf29Q8N999 325 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 GABPB2Q8TAK5 448 aaPredicted RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 TBL1YQ9BQ87 522 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 DPEP3Q9H4B8 488 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 DHX35Q9H5Z1 703 aaKnown RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.86□□□□□ -0.997e-6■■■■■ 74.5
CPNE8-201ENST00000331366 NCKIPSDQ9NZQ3 722 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 NDUFAF1Q9Y375 327 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 NEUROG3Q9Y4Z2 214 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 COMMD10Q9Y6G5 202 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 EEDO75530 441 aaKnown RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 PTPN1P18031 435 aaKnown RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 XRCC1P18887 633 aaPredicted RBP8.86□□□□□ -0.99
CPNE8-201ENST00000331366 PHEXP78562 749 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 GRM3Q14832 879 aa8.86□□□□□ -0.99
CPNE8-201ENST00000331366 SNX17Q15036 470 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms