RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SDK1Q7Z5N4 2213 aa8.8□□□□□ -1
USF3-201ENST00000316407 LOC100509620A0A075B734 347 aa8.8□□□□□ -1
USF3-201ENST00000316407 CHRM5P08912 532 aaPredicted RBP8.8□□□□□ -1
USF3-201ENST00000316407 TNFAIP8L3Q5GJ75 292 aa8.8□□□□□ -1
USF3-201ENST00000316407 SPANXN3Q5MJ09 141 aa8.8□□□□□ -1
USF3-201ENST00000316407 CLNKQ7Z7G1 428 aa8.8□□□□□ -1
USF3-201ENST00000316407 CBR4Q8N4T8 237 aa8.8□□□□□ -1
USF3-201ENST00000316407 DNAJC18Q9H819 358 aa8.8□□□□□ -1
USF3-201ENST00000316407 MSL3P1P0C860 447 aa8.8□□□□□ -1
USF3-201ENST00000316407 HMGCS2P54868 508 aa8.8□□□□□ -1
USF3-201ENST00000316407 CRY1Q16526 586 aa8.8□□□□□ -1
USF3-201ENST00000316407 FER1L6Q2WGJ9 1857 aa8.8□□□□□ -1
USF3-201ENST00000316407 TCF12Q99081 682 aa8.8□□□□□ -1
USF3-201ENST00000316407 S100A14Q9HCY8 104 aa8.8□□□□□ -1
USF3-201ENST00000316407 LRIG2O94898 1065 aa8.8□□□□□ -1
USF3-201ENST00000316407 CRTAMO95727 393 aa8.8□□□□□ -1
USF3-201ENST00000316407 CDK7P50613 346 aa8.8□□□□□ -1
USF3-201ENST00000316407 TCEAL5Q5H9L2 206 aa8.8□□□□□ -1
USF3-201ENST00000316407 HYIQ5T013 277 aa8.8□□□□□ -1
USF3-201ENST00000316407 KCNK18Q7Z418 384 aa8.8□□□□□ -1
USF3-201ENST00000316407 NAT9Q9BTE0 207 aa8.8□□□□□ -1
USF3-201ENST00000316407 ATPIF1Q9UII2 106 aa8.8□□□□□ -1
USF3-201ENST00000316407 TIMM8BQ9Y5J9 83 aaPredicted RBP8.8□□□□□ -1
USF3-201ENST00000316407 SPACA6W5XKT8 324 aa8.8□□□□□ -1
USF3-201ENST00000316407 VPS4BO75351 444 aa8.79□□□□□ -1
USF3-201ENST00000316407 DHFRP00374 187 aa8.79□□□□□ -1
USF3-201ENST00000316407 GP5P40197 560 aa8.79□□□□□ -1
USF3-201ENST00000316407 CSTF1Q05048 431 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 EFEMP1Q12805 493 aa8.79□□□□□ -1
USF3-201ENST00000316407 GPR162Q16538 588 aa8.79□□□□□ -1
USF3-201ENST00000316407 FITM2Q8N6M3 262 aa8.79□□□□□ -1
USF3-201ENST00000316407 PTCD3Q96EY7 689 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 OR6C70A6NIJ9 312 aa8.79□□□□□ -1
USF3-201ENST00000316407 AXIN1O15169 862 aa8.79□□□□□ -1
USF3-201ENST00000316407 RAB2AP61019 212 aa8.79□□□□□ -1
USF3-201ENST00000316407 CAMK1Q14012 370 aa8.79□□□□□ -1
USF3-201ENST00000316407 E2F2Q14209 437 aa8.79□□□□□ -1
USF3-201ENST00000316407 DSELQ8IZU8 1212 aa8.79□□□□□ -1
USF3-201ENST00000316407 CLHC1Q8NHS4 586 aa8.79□□□□□ -1
USF3-201ENST00000316407 MAGEB2O15479 319 aa8.79□□□□□ -1
USF3-201ENST00000316407 GABBR2O75899 941 aa8.79□□□□□ -1
USF3-201ENST00000316407 ACO1P21399 889 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 ARHGDIBP52566 201 aa8.79□□□□□ -1
USF3-201ENST00000316407 MAPK12P53778 367 aa8.79□□□□□ -1
USF3-201ENST00000316407 STILQ15468 1287 aa8.79□□□□□ -1
USF3-201ENST00000316407 PAN2Q504Q3 1202 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 TEX47Q8TBZ9 253 aa8.79□□□□□ -1
USF3-201ENST00000316407 SMG7Q92540 1137 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 GPN1Q9HCN4 374 aaPredicted RBP8.79□□□□□ -1
USF3-201ENST00000316407 SHROOM3Q8TF72 1996 aa8.79□□□□□ -1
USF3-201ENST00000316407 MED24O75448 989 aa8.79□□□□□ -1
USF3-201ENST00000316407 GRB10Q13322 594 aa8.79□□□□□ -1
USF3-201ENST00000316407 NAE1Q13564 534 aa8.79□□□□□ -1
USF3-201ENST00000316407 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
USF3-201ENST00000316407 VWA5B1Q5TIE3 1220 aa8.79□□□□□ -1
USF3-201ENST00000316407 KIAA0895Q8NCT3 520 aa8.79□□□□□ -1
USF3-201ENST00000316407 NEK7Q8TDX7 302 aa8.79□□□□□ -1
USF3-201ENST00000316407 TAS1R2Q8TE23 839 aa8.79□□□□□ -1
USF3-201ENST00000316407 HTR3CQ8WXA8 447 aa8.79□□□□□ -1
USF3-201ENST00000316407 VAT1Q99536 393 aa8.79□□□□□ -1
USF3-201ENST00000316407 STN1Q9H668 368 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 C9JVG2 144 aa8.79□□□□□ -1
USF3-201ENST00000316407 LHCGRP22888 699 aa8.79□□□□□ -1
USF3-201ENST00000316407 CCR1P32246 355 aa8.79□□□□□ -1
USF3-201ENST00000316407 IL6STP40189 918 aaPredicted RBP8.79□□□□□ -1
USF3-201ENST00000316407 DPYSQ14117 519 aa8.79□□□□□ -1
USF3-201ENST00000316407 FAM187BQ17R55 369 aa8.79□□□□□ -1
USF3-201ENST00000316407 BRSK2Q8IWQ3 736 aa8.79□□□□□ -1
USF3-201ENST00000316407 YAF2Q8IY57 180 aa8.79□□□□□ -1
USF3-201ENST00000316407 RAD51AP1Q96B01 352 aa8.79□□□□□ -1
USF3-201ENST00000316407 C12orf43Q96C57 262 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 ERMAPQ96PL5 475 aaPredicted RBP8.79□□□□□ -1
USF3-201ENST00000316407 TAS2R14Q9NYV8 317 aa8.79□□□□□ -1
USF3-201ENST00000316407 PTBP2Q9UKA9 531 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 MTF2Q9Y483 593 aaPredicted RBP8.79□□□□□ -1
USF3-201ENST00000316407 H3BNX3 289 aa8.79□□□□□ -1
USF3-201ENST00000316407 GMFGO60234 142 aa8.79□□□□□ -1
USF3-201ENST00000316407 TPST2O60704 377 aa8.79□□□□□ -1
USF3-201ENST00000316407 ZNF12P17014 697 aa8.79□□□□□ -1
USF3-201ENST00000316407 SCN1BQ07699 218 aa8.79□□□□□ -1
USF3-201ENST00000316407 FAM156AQ8NDB6 213 aa8.79□□□□□ -1
USF3-201ENST00000316407 SQORQ9Y6N5 450 aa8.79□□□□□ -1
USF3-201ENST00000316407 ITGALP20701 1170 aa8.79□□□□□ -1
USF3-201ENST00000316407 GEMP55040 296 aa8.79□□□□□ -1
USF3-201ENST00000316407 ZNF234Q14588 700 aa8.79□□□□□ -1
USF3-201ENST00000316407 COLEC12Q5KU26 742 aa8.79□□□□□ -1
USF3-201ENST00000316407 EFCAB12Q6NXP0 572 aa8.79□□□□□ -1
USF3-201ENST00000316407 WDR37Q9Y2I8 494 aa8.79□□□□□ -1
USF3-201ENST00000316407 APOL3O95236 402 aa8.79□□□□□ -1
USF3-201ENST00000316407 HNF4AP41235 474 aa8.79□□□□□ -1
USF3-201ENST00000316407 RXRGP48443 463 aa8.79□□□□□ -1
USF3-201ENST00000316407 PRKAG1P54619 331 aa8.79□□□□□ -1
USF3-201ENST00000316407 DLG1Q12959 904 aa8.79□□□□□ -1
USF3-201ENST00000316407 ANKRD26P1Q6NSI1 321 aa8.79□□□□□ -1
USF3-201ENST00000316407 SPOCK2Q92563 424 aa8.79□□□□□ -1
USF3-201ENST00000316407 NMUR2Q9GZQ4 415 aa8.79□□□□□ -1
USF3-201ENST00000316407 XKR8Q9H6D3 395 aa8.79□□□□□ -1
USF3-201ENST00000316407 YARS2Q9Y2Z4 477 aaKnown RBP8.79□□□□□ -1
USF3-201ENST00000316407 POLR3HQ9Y535 204 aaPredicted RBP8.79□□□□□ -1
USF3-201ENST00000316407 PEX11AO75192 247 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms