RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 MTFR2Q6P444 385 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 CLIP4Q8N3C7 705 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 B3GNT4Q9C0J1 378 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 TMEM216Q9P0N5 145 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 ZNHIT2Q9UHR6 403 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 PCM1Q15154 2024 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 PDCD5O14737 125 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 AMPD2Q01433 879 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 MPP3Q13368 585 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 RAD9BQ6WBX8 426 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 LINGO2Q7L985 606 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 NXPE2Q96DL1 559 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 BTBD10Q9BSF8 475 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 MSX1P28360 303 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 PTPN4P29074 926 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 TRAPPC11Q7Z392 1133 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 SLFN11Q7Z7L1 901 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 METTL16Q86W50 562 aaKnown RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 KIAA0232Q92628 1395 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 FBXO9Q9UK97 447 aaPredicted RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 SPTBP11277 2137 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 MYOM2P54296 1465 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 PLEKHG1Q9ULL1 1385 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 A0A096LPK6 155 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 CST1P01037 141 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 RBM44Q6ZP01 1051 aaKnown RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 ANKRD6Q9Y2G4 727 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 IL18RAPO95256 599 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 ETS2P15036 469 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 SNAP47Q5SQN1 464 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 STRA6Q9BX79 667 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 ZCCHC2Q9C0B9 1178 aaKnown RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 GANQ9H2C0 597 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 TBCCD1Q9NVR7 557 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 LGR5O75473 907 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 SLC6A2P23975 617 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 MCAMP43121 646 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 PKNOX1P55347 436 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 CDK10Q15131 360 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 SLCO6A1Q86UG4 719 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 TMEM169Q96HH4 297 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 DMRTB1Q96MA1 342 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 FAM20AQ96MK3 541 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 DCXO43602 365 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 PIK3CGP48736 1102 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 RPL10AP62906 217 aaKnown RBP15.88■□□□□ 0.13
UBR3-201ENST00000272793 PRKCDQ05655 676 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 ORC1Q13415 861 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 CBWD6Q4V339 395 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 RNF43Q68DV7 783 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 EHD4Q9H223 541 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 CLIC5Q9NZA1 410 aa15.88■□□□□ 0.13
UBR3-201ENST00000272793 HCN1O60741 890 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 PLEKP08567 350 aaPredicted RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 ZNF730Q6ZMV8 503 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 USP12O75317 370 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 MED24O75448 989 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 SPARCP09486 303 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 SNRNP35Q16560 246 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 MCFD2Q8NI22 146 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 SLC22A8Q8TCC7 542 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 MRPS31Q92665 395 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 SNTG1Q9NSN8 517 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 TMLHEQ9NVH6 421 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 ANPEPP15144 967 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 YY1P25490 414 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 ZC2HC1CQ53FD0 456 aaPredicted RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 LCN1P1Q5VSP4 162 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 ADNP2Q6IQ32 1131 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 PNPT1Q8TCS8 783 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 GPATCH1Q9BRR8 931 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 CLCA1A8K7I4 914 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 KCNA6P17658 529 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 ME2P23368 584 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 KLHL26Q53HC5 615 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 UBE2R2Q712K3 238 aaPredicted RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 A0A1B0GVC2 190 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 ITGA2P17301 1181 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 PER3P56645 1201 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 TUBA4AP68366 448 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 TMPRSS11AQ6ZMR5 421 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 DCP1BQ8IZD4 617 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 COQ8BQ96D53 544 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 SSX3Q99909 188 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 YARS2Q9Y2Z4 477 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 VILLO15195 856 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 FADS2O95864 444 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 IFNA2P01563 188 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 AIMP2Q13155 320 aaKnown RBP15.87■□□□□ 0.13
UBR3-201ENST00000272793 ZNF549Q6P9A3 640 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 MIPEPQ99797 713 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 AASSQ9UDR5 926 aa15.87■□□□□ 0.13
UBR3-201ENST00000272793 HECTD3Q5T447 861 aa15.86■□□□□ 0.13
UBR3-201ENST00000272793 ATF7IP2Q5U623 682 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms