RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 STX5Q13190 355 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 SEPT6Q14141 434 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 KIF19Q2TAC6 998 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 ESRP1Q6NXG1 681 aaKnown RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 PIGZQ86VD9 579 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 ZNF513Q8N8E2 541 aaPredicted RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 IPMKQ8NFU5 416 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 C12orf42Q96LP6 360 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 UPF3AQ9H1J1 476 aaKnown RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 TBC1D23Q9NUY8 699 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 CROTQ9UKG9 612 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 A0A087WXM4 84 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 B4GAT1O43505 415 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 COQ9O75208 318 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 BEST1O76090 585 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 OCM2P0CE71 109 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 OCMP0CE72 109 aaPredicted RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 STMN1P16949 149 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 UGT1A1P22309 533 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 UGT1A4P22310 534 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 UGT1A3P35503 534 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 UGT1A5P35504 534 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 SFSWAPQ12872 951 aaKnown RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 TRAF2Q12933 501 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 GEN1Q17RS7 908 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 ANKRD60Q9BZ19 345 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 VRTNQ9H8Y1 702 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
LMNB1-201ENST00000261366 MTF2Q9Y483 593 aaPredicted RBP16.05■□□□□ 0.16
LMNB1-201ENST00000261366 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 APOA4P06727 396 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SNRPB2P08579 225 aaKnown RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 ZNF182P17025 639 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 EEF1B2P24534 225 aaKnown RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 AKAP5P24588 427 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 RXRGP48443 463 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 CLCN2P51788 898 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 TPI1P60174 286 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 GNA12Q03113 381 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 TNFAIP2Q03169 654 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 CD300CQ08708 224 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 RFTN1Q14699 578 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 HERC3Q15034 1050 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 GRAMD4Q6IC98 578 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 TFAP2CQ92754 450 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 GFM2Q969S9 779 aaKnown RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 DCPSQ96C86 337 aaKnown RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 ADI1Q9BV57 179 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 RHOJQ9H4E5 214 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 CASS4Q9NQ75 786 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 OAZ3Q9UMX2 235 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SHROOM3Q8TF72 1996 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 TRPC5OSA6NMA1 111 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 H3BMQ9 156 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 K7EPI3 171 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 TRIM24O15164 1050 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 NCAM1P13591 858 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 OXTRP30559 389 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SLC12A2P55011 1212 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 C21orf59P57076 290 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SLC25A52Q3SY17 297 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 LYSMD3Q7Z3D4 306 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 COG8Q96MW5 612 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 BIRC8Q96P09 236 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 CNOT11Q9UKZ1 510 aaKnown RBP16.04■□□□□ 0.16
LMNB1-201ENST00000261366 SQORQ9Y6N5 450 aa16.04■□□□□ 0.16
LMNB1-201ENST00000261366 CITO14578 2027 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 SLCO1B7G3V0H7 640 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 I6L893 689 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 MTHFD1P11586 935 aaKnown RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 CYP2B6P20813 491 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 CES1P23141 567 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 BCAT1P54687 386 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 CDH13P55290 713 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 SNX16P57768 344 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 RAB10P61026 200 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 VGLL4Q14135 290 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 ZBED5Q49AG3 693 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 OTUD1Q5VV17 481 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 ZNF470Q6ECI4 717 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 EPHX4Q8IUS5 362 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 SHCBP1Q8NEM2 672 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 TCF12Q99081 682 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 TRNAU1APQ9NX07 287 aaKnown RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 DSEQ9UL01 958 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 COQ6Q9Y2Z9 468 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 NRP2O60462 931 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 TOMM70O94826 608 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 DDNO94850 711 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 KCNH1O95259 989 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 ZNF286BP0CG31 522 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 CASP2P42575 452 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
LMNB1-201ENST00000261366 RAB39AQ14964 217 aa16.03■□□□□ 0.16
LMNB1-201ENST00000261366 TGFBIQ15582 683 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms