RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 NadkP58058 439 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vbp1P61759 196 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyb5d1Q5NCY3 228 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nrde2Q80XC6 1172 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Q8BL95 290 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lpgat1Q91YX5 370 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Chil5A0A0G2JDS2 431 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm2888K7N746 267 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc1a6O35544 561 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Sema3cQ62181 751 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vps26bQ8C0E2 336 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Usp20Q8C6M1 916 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pacs1Q8K212 961 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nif3l1Q9EQ80 376 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ms4a14A0A087WSD2 1232 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyp2d9P11714 504 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fads2p1Q0VAX3 487 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 LbpQ61805 481 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Sult1c1Q80VR3 304 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc25a12Q8BH59 677 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ing4Q8C0D7 249 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Klhl25Q8R2P1 589 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pmf1Q9CPV5 202 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gpc6Q9R087 555 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Net1Q9Z206 595 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Zfp985A2A7A5 519 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Zfp969A2ART2 485 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Zfp973A2BE20 318 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Irf1P15314 329 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Stfa3P35173 103 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nr2f1Q60632 422 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Frmd5Q6P5H6 517 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Phf8Q80TJ7 1023 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pabpc5Q8C7D3 381 aaKnown RBP12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Serpina11Q8CIE0 424 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fbxl8Q8CIG9 374 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fmo2Q8K2I3 535 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Grk1Q9WVL4 564 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ubr1O70481 1757 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Clca3bE9PUL3 1044 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Kpna4O35343 521 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc6a2O55192 617 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lta4hP24527 611 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dppa5bP85965 119 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 GmpsQ3THK7 693 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Kcnh1Q60603 989 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hspbap1Q8BK58 483 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr532Q8VGT4 309 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pcdhb19Q91Y01 801 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fbxo16Q9QZM9 334 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Itgb6Q9Z0T9 787 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Kifc5bE9PUA5 672 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 BgnP28653 369 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Arf4P61750 180 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rtkn2Q14B46 604 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nyap1Q6PFX7 833 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Elmo1Q8BPU7 727 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr695Q8VFM3 315 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr1353Q8VGU8 309 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Znf521Q6KAS7 1311 aa12.02□□□□□ -0.48
Trim56-201ENSMUST00000054384 Glipr1l3A0A1W2P7V2 236 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Btnl6A2CG22 539 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 AlpiF8VPQ6 554 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Il1rnP25085 178 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Cdh4P39038 913 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Arnt2Q61324 712 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ints7Q7TQK1 966 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fbxl4Q8BH70 621 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fbxo38Q8BMI0 1194 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Sv2aQ9JIS5 742 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Tuba8Q9JJZ2 449 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Trpc4apQ9JLV2 797 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Sirpb1aA0A0A6YYP6 397 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Slc9a6A1L3P4 702 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Glyatl3E9Q5L8 290 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Fbrsl1E9Q9T0 1031 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 TpteG5E8H5 664 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Unc5cO08747 931 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Slc28a2O88627 660 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Myl4P09541 193 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 ArP19091 899 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Emilin3P59900 758 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Trpv5P69744 723 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mettl21cQ8BLU2 248 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Grik4Q8BMF5 956 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 GhrlQ9EQX0 117 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Prex1Q69ZK0 1650 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 CtskP55097 329 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zfp868Q3UTQ6 422 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Med22Q62276 200 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zfp180Q6NZI9 655 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Zbtb24Q80X44 710 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Mrps35Q8BJZ4 320 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Adamts2Q8C9W3 1213 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Chid1Q922Q9 393 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 PdgfdQ925I7 370 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Ahdc1Q6PAL7 1594 aaKnown RBP12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 AccsA2AIG8 502 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Klhl3E0CZ16 587 aa12.02□□□□□ -0.49
Trim56-201ENSMUST00000054384 Gm4307E9PZY4 289 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms