RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 EPS8L3Q8TE67 593 aaKnown RBP10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 LRRC39Q96DD0 335 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 RSPRY1Q96DX4 576 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 ALG14Q96F25 216 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 IMP4Q96G21 291 aaKnown RBP10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 CFAP36Q96G28 342 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 PPP1R2P1Q96PQ5 205 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 TBL1YQ9BQ87 522 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 APOL2Q9BQE5 337 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 FEM1AQ9BSK4 669 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 TMEM109Q9BVC6 243 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 ROPN1BQ9BZX4 212 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 CENPHQ9H3R5 247 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 KIF9Q9HAQ2 790 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 ROPN1Q9HAT0 212 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 ATP13A2Q9NQ11 1180 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 TBC1D14Q9P2M4 693 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 VPS28Q9UK41 221 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 MAD1L1Q9Y6D9 718 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 WNT6Q9Y6F9 365 aa10.08□□□□□ -0.8
SOX2-OT-244ENST00000627738 C2orf16Q68DN1 1984 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 SDR42E2A6NKP2 422 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 RASGRF2O14827 1237 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 MUSKO15146 869 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 GJB3O75712 270 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 ZMPSTE24O75844 475 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 AGTP01019 485 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 MMP2P08253 660 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 WEE1P30291 646 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 ADRA1AP35348 466 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 VIPR2P41587 438 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 CD86P42081 329 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 SLCO1A2P46721 670 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 CRADDP78560 199 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 MPP3Q13368 585 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 ADAM15Q13444 863 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 ELOAQ14241 798 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 RFTN1Q14699 578 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 CYTH1Q15438 398 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 FAM78AQ5JUQ0 283 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 RNF43Q68DV7 783 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 KDELC1Q6UW63 502 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 LINGO4Q6UY18 593 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 C3orf62Q6ZUJ4 267 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 LINC00523Q86TU6 105 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 APCDD1Q8J025 514 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 DNAAF3Q8N9W5 541 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 FIBINQ8TAL6 211 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 ARRDC2Q8TBH0 407 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 FBF1Q8TES7 1133 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 FGF13Q92913 245 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 IRF7Q92985 503 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 LRRC3BQ96PB8 259 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 EBNA1BP2Q99848 306 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 SEMA3CQ99985 751 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 CCDC77Q9BR77 488 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 FICDQ9BVA6 458 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 CINPQ9BW66 212 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 POLR1EQ9GZS1 481 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 SPHK2Q9NRA0 654 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 SYBUQ9NX95 663 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 KIAA1522Q9P206 1035 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 BCCIPQ9P287 314 aaKnown RBP eCLIP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 ZC3H7BQ9UGR2 993 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 SEPT3Q9UH03 358 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 OR51B4Q9Y5P0 310 aa10.07□□□□□ -0.8
SOX2-OT-244ENST00000627738 RANBP2P49792 3224 aaKnown RBP10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CEP290O15078 2479 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 EXOC1LA0A1B0GW35 172 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 NEDD8-MDP1E9PL57 170 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 SLC9A3R1O14745 358 aaPredicted RBP10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CD160O95971 181 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 PENKP01210 267 aaPredicted RBP10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 IVLP07476 585 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 TPH1P17752 444 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CD70P32970 193 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 NPY2RP49146 381 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 WNT3AP56704 352 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CDH17Q12864 832 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 IHHQ14623 411 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 PCSK7Q16549 785 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 SKIDA1Q1XH10 827 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 LY6G5CQ5SRR4 150 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CERCAMQ5T4B2 595 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 AGBL2Q5U5Z8 902 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 KCTD16Q68DU8 428 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CASC4Q6P4E1 433 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 UNC5AQ6ZN44 842 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 CROCCP2Q86T23 111 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 ADGRG2Q8IZP9 1017 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 DCAF4L2Q8NA75 395 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 HPS1Q92902 700 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 SMARCD2Q92925 531 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 OTUB2Q96DC9 234 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 LMLNQ96KR4 655 aa10.06□□□□□ -0.8
SOX2-OT-244ENST00000627738 ATP6V1G3Q96LB4 118 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms