RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 CLDN11O75508 207 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 UNC5CO95185 931 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 TGDSO95455 350 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 IDO1P14902 403 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 S100A3P33764 101 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 BNIP2Q12982 314 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 NOMO1Q15155 1222 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 C16orf59Q7L2K0 433 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 DENND1CQ8IV53 801 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 CLEC4DQ8WXI8 215 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 TRMOQ9BU70 441 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 EIF2B3Q9NR50 452 aaKnown RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 AHDC1Q5TGY3 1603 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 COL1A1P02452 1464 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 PAGE1O75459 146 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 TRAPPC9Q96Q05 1148 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 USE1Q9NZ43 259 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 KLHL20Q9Y2M5 609 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 SMIM28A0A1B0GU29 152 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 SELPP16109 830 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 CCR3P51677 355 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 TCHHL1Q5QJ38 904 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 TMEM245Q9H330 911 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 RAP2CQ9Y3L5 183 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 RPTORQ8N122 1335 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 SGTAO43765 313 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 CCDC166P0CW27 439 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 LPOP22079 712 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 TSNQ15631 228 aaKnown RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 C10orf53Q8N6V4 93 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 SEMA3CQ99985 751 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 MLPHQ9BV36 600 aaPredicted RBP9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 RHOJQ9H4E5 214 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 RPS6KA6Q9UK32 745 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 ANKRD36CQ5JPF3 1778 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 MAST2Q6P0Q8 1798 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 SPTBN2O15020 2390 aa9.21□□□□□ -0.94
SPTBN1-207ENST00000615901 PSMG1O95456 288 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 OTCP00480 354 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GRIA4P48058 902 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CCDC142Q17RM4 750 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 MFSD4BQ5TF39 518 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 TRABD2AQ86V40 505 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 FIBCD1Q8N539 461 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SLC4A11Q8NBS3 891 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GRIN3AQ8TCU5 1115 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SKA1Q96BD8 255 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 USP12O75317 370 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 RECQL5O94762 991 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CBX6O95503 412 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GLUD2P49448 558 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GNA13Q14344 377 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 RAP1GAP2Q684P5 730 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ITFG1Q8TB96 612 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CXorf40AQ8TE69 158 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 C2orf15Q8WU43 125 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 TMEM237Q96Q45 408 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 PCDHB18PQ96TA0 734 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ACE2Q9BYF1 805 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 MSRAQ9UJ68 235 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GCATO75600 419 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ZSCAN5DPP0CG00 497 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 PTPN20Q4JDL3 420 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CRELD2Q6UXH1 353 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ATG16L2Q8NAA4 619 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 PROX1Q92786 737 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ZCWPW1Q9H0M4 648 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 RWDD3Q9Y3V2 267 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CACNA1GO43497 2377 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 C1QTNF3-AMACRE9PGA6 284 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CNOT3O75175 753 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 C4BPAP04003 597 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 COX7A2P14406 83 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 HPGDP15428 266 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ZNF549Q6P9A3 640 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SLC41A1Q8IVJ1 513 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SPAG4Q9NPE6 437 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 ENTPD4Q9Y227 616 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 A0A0U1RQJ8 604 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 TRAFD1O14545 582 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 PGK1P00558 417 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 CALCAP01258 141 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 PABPC1P11940 636 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 UQCRBP14927 111 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 LAG3P18627 525 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SNX30Q5VWJ9 437 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GPRIN3Q6ZVF9 776 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 LEF1Q9UJU2 399 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 TBC1D30Q9Y2I9 924 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 TBL1XO60907 577 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 INTS11Q5TA45 600 aaKnown RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SLC24A5Q71RS6 500 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 RBFAQ8N0V3 343 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 GBA3Q9H227 469 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SEMA4BQ9NPR2 832 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 SNX15Q9NRS6 342 aa9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.2□□□□□ -0.94
SPTBN1-207ENST00000615901 PNMA8BQ9ULN7 279 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms