RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 CTTNBP2NLQ9P2B4 639 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 CA5BQ9Y2D0 317 aa18.75■□□□□ 0.59
SHKBP1-202ENST00000593764 SPAARA0A1B0GVQ0 90 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 AKR1B15C9JRZ8 316 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 PRAMEF26H0Y7S4 382 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 TLR4O00206 839 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 DFFAO00273 331 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 SLC31A1O15431 190 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 SPINT1O43278 529 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 AKR1B10O60218 316 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 PROSCO94903 275 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 IGSF6O95976 241 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 TMEM253P0C7T8 217 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 ABL2P42684 1182 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 ARSEP51690 589 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 FGL2Q14314 439 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 ATP13A4Q4VNC1 1196 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 GDPD4Q6W3E5 623 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 IQCHQ86VS3 1027 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 SPATS2Q86XZ4 545 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 CNGA4Q8IV77 575 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 SKA1Q96BD8 255 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 EXOC2Q96KP1 924 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 CCDC42Q96M95 316 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 CPEB1Q9BZB8 566 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 SPTLC3Q9NUV7 552 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 PCOLCE2Q9UKZ9 415 aa18.74■□□□□ 0.59
SHKBP1-202ENST00000593764 A0A1B0GTQ1 180 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 PCDHGA12O60330 932 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 CD48P09326 243 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 RGRP47804 291 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 NXPH1P58417 271 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 SIM1P81133 766 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 RAD51Q06609 339 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 IL10RBQ08334 325 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 STAT4Q14765 748 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 SHBQ15464 509 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 TC2NQ8N9U0 490 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 TSEN2Q8NCE0 465 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 RAB7BQ96AH8 199 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 FEM1CQ96JP0 617 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 ELF4Q99607 663 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 FZD3Q9NPG1 666 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 DKK3Q9UBP4 350 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 IPO11Q9UI26 975 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 GGT7Q9UJ14 662 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 WASF3Q9UPY6 502 aa18.73■□□□□ 0.59
SHKBP1-202ENST00000593764 AREL1O15033 823 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 DFNA5O60443 496 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 BUB1BO60566 1050 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 PALMO75781 387 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 TIMP2P16035 220 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 CDH6P55285 790 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 TAS2R40P59535 323 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 RPS21P63220 83 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 OVGP1Q12889 678 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 MMRN1Q13201 1228 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 HNRNPDQ14103 355 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 TRIP6Q15654 476 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 HADHQ16836 314 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 SLC45A4Q5BKX6 768 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 KIAA1161Q6NSJ0 714 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 TMCO3Q6UWJ1 677 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 SLC35G2Q8TBE7 412 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 SETD7Q8WTS6 366 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 SLC17A9Q9BYT1 436 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 GDF3Q9NR23 364 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 ITM2BQ9Y287 266 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 BTBD3Q9Y2F9 522 aa18.72■□□□□ 0.59
SHKBP1-202ENST00000593764 MUSKO15146 869 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 TSPAN6O43657 245 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 PIGNO95427 931 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 PEX11BO96011 259 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 PAK4O96013 591 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 HNRNPA2B1P22626 353 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 SSR1P43307 286 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 CSNK1DP48730 415 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 CCT8P50990 548 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 SHC2P98077 582 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 IL9RQ01113 521 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 RFTN1Q14699 578 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 SUZ12Q15022 739 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 TTC7BQ86TV6 843 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 GAS2L3Q86XJ1 694 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 BAHD1Q8TBE0 780 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 NSMCE3Q96MG7 304 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 MYOCQ99972 504 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 C1QTNF2Q9BXJ5 285 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 ERVMER34-1Q9H9K5 563 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 SP110Q9HB58 689 aa18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 RCOR3Q9P2K3 495 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 TP53BP1Q12888 1972 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-202ENST00000593764 ACACBO00763 2458 aa18.71■□□□□ 0.58
SHKBP1-202ENST00000593764 CHD8Q9HCK8 2581 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 IGLON5A6NGN9 336 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 RAD51BO15315 384 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 FLRT2O43155 660 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 MAFKO60675 156 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms