RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 ST3GAL5Q9UNP4 418 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 MTO1Q9Y2Z2 717 aaKnown RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 SRPRBQ9Y5M8 271 aaKnown RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 HS3ST4Q9Y661 456 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
ATG4D-210ENST00000588972 MYH11P35749 1972 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 SPTBN2O15020 2390 aa8.17□□□□□ -1.1
ATG4D-210ENST00000588972 KMT2BQ9UMN6 2715 aaPredicted RBP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 FCHO1O14526 889 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 SPTLC2O15270 562 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 SNX2O60749 519 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 XRCC6P12956 609 aaKnown RBP eCLIP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 DARSP14868 501 aaKnown RBP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 PECAM1P16284 738 aaPredicted RBP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 TPH1P17752 444 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 PI3P19957 117 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 PBX3P40426 434 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 UBA7P41226 1012 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 POLE2P56282 527 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 CAPSQ13938 189 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 CSRP2Q16527 193 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 SLC5A9Q2M3M2 681 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 ZNF568Q3ZCX4 644 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 PLA1AQ53H76 456 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 RARS2Q5T160 578 aaKnown RBP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 DOK3Q7L591 496 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 GPRIN1Q7Z2K8 1008 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 CPOQ8IVL8 374 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 CCDC105Q8IYK2 499 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 CARFQ8N187 725 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 MRPL43Q8N983 215 aaKnown RBP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 RNF149Q8NC42 400 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 RASSF8Q8NHQ8 419 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 ZFP28Q8NHY6 868 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 ADAMTS17Q8TE56 1095 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 TCP11Q8WWU5 503 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 AK8Q96MA6 479 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 CASD1Q96PB1 797 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 JPH2Q9BR39 696 aaPredicted RBP8.16□□□□□ -1.1
ATG4D-210ENST00000588972 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 DKK4Q9UBT3 224 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 TMEM98Q9Y2Y6 226 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 DTNAQ9Y4J8 743 aa8.16□□□□□ -1.1
ATG4D-210ENST00000588972 A0A1B0GTL3 188 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 A0A1W2PRX2 142 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 PPP6R2O75170 966 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 YEATS4O95619 227 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 WEE2P0C1S8 567 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 PLA2G4BP0C869 781 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 GLRA2P23416 452 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ATICP31939 592 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ARL2P36404 184 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 PTDSS1P48651 473 aaKnown RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 FAM189BP81408 668 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 BOP1Q14137 746 aaKnown RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ANGPT1Q15389 498 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 INSCQ1MX18 579 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ARTNQ5T4W7 220 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 RINT1Q6NUQ1 792 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 FAM180BQ6P0A1 224 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 LRRC55Q6ZSA7 311 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ZNF410Q86VK4 478 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 SLC39A11Q8N1S5 342 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 RNF169Q8NCN4 708 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 MCPH1Q8NEM0 835 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 TFAP2CQ92754 450 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 CALML4Q96GE6 196 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 LCORQ96JN0 433 aaPredicted RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ZNF512Q96ME7 567 aaPredicted RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 RTP3Q9BQQ7 232 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 MRPL9Q9BYD2 267 aaKnown RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 PANK2Q9BZ23 570 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 GCOM2Q9BZD3 368 aaPredicted RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 NT5C3AQ9H0P0 336 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 PABPC3Q9H361 631 aaKnown RBP8.15□□□□□ -1.1
ATG4D-210ENST00000588972 UBN1Q9NPG3 1134 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 BLOC1S4Q9NUP1 217 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 ZSCAN32Q9NX65 697 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 LPAR3Q9UBY5 353 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 DUSP12Q9UNI6 340 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 RPS6KL1Q9Y6S9 549 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 GPR179Q6PRD1 2367 aa8.15□□□□□ -1.1
ATG4D-210ENST00000588972 CHD8Q9HCK8 2581 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 HMX3A6NHT5 357 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 LRRIQ4A6NIV6 560 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 ETV2O00321 342 aaPredicted RBP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 DCLK1O15075 740 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 VPS4BO75351 444 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 USP1O94782 785 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 ACTL6BO94805 426 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 PRSS23O95084 383 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 LMNAP02545 664 aaKnown RBP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 EDN1P05305 212 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CYP11B2P19099 503 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 SFPQP23246 707 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CA8P35219 290 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 ME1P48163 572 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 SLC12A3P55017 1021 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 MBTD1Q05BQ5 628 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 TDGQ13569 410 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms