RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 FBXL21Q9UKT6 434 aa12.66□□□□□ -0.38
EDC3-217ENST00000569606 AAR2Q9Y312 384 aaKnown RBP12.66□□□□□ -0.38
EDC3-217ENST00000569606 CKAP5Q14008 2032 aa12.66□□□□□ -0.38
EDC3-217ENST00000569606 GOLGA6CA6NDK9 693 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 GOLGA6BA6NDN3 693 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 NDC80O14777 642 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 NPC1O15118 1278 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 PSMD3O43242 534 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 BNIP3LO60238 219 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 TMEM63AO94886 807 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 AP2A1O95782 977 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 APRTP07741 180 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 SERPINF2P08697 491 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 GOLGA6DP0CG33 693 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 PRKCHP24723 683 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 CARSP49589 748 aaKnown RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 CCNHP51946 323 aaPredicted RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 MRPS21P82921 87 aaKnown RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 CALCOCO2Q13137 446 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 OLIG2Q13516 323 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 MORF4L2Q15014 288 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 ELF2Q15723 593 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 DPY19L3Q6ZPD9 716 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 HOOK3Q86VS8 718 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 OR6K2Q8NGY2 324 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 ART4Q93070 314 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 MRGPRX2Q96LB1 330 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 NECAB3Q96P71 396 aaPredicted RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 VPS45Q9NRW7 570 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 GOLGA6AQ9NYA3 693 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 HECAQ9UBI9 543 aaPredicted RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 ANAPC5Q9UJX4 755 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 NDRG2Q9UN36 371 aaKnown RBP12.65□□□□□ -0.38
EDC3-217ENST00000569606 SHOC2Q9UQ13 582 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 STON1Q9Y6Q2 735 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 COL6A3P12111 3177 aa12.65□□□□□ -0.38
EDC3-217ENST00000569606 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.39
EDC3-217ENST00000569606 EDDM13A0A1B0GTR0 161 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 SMAPO00193 183 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 SIN3BO75182 1162 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 PMPCBO75439 489 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 SUN1O94901 812 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 TARSP26639 723 aaKnown RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 ECHS1P30084 290 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 NTSR1P30989 418 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 GKP32189 559 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 ADRA1AP35348 466 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 WASP42768 502 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 MAPK8P45983 427 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 LMAN1P49257 510 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 WNT3AP56704 352 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 CDK16Q00536 496 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 CAV1Q03135 178 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 CUL1Q13616 776 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 SPARCL1Q14515 664 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 MYLK3Q32MK0 819 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 C2orf27AQ580R0 203 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 C9orf64Q5T6V5 341 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 WDR93Q6P2C0 686 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.64□□□□□ -0.39
EDC3-217ENST00000569606 CHPFQ8IZ52 775 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 SIX5Q8N196 739 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 IL17RCQ8NAC3 791 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 CHST14Q8NCH0 376 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 MCUQ8NE86 351 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 IPMKQ8NFU5 416 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 SHDQ96IW2 340 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 GABRG3Q99928 467 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 FAM129AQ9BZQ8 928 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 NEUROG2Q9H2A3 272 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 LRRC40Q9H9A6 602 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 MRPS17Q9Y2R5 130 aaKnown RBP12.64□□□□□ -0.39
EDC3-217ENST00000569606 PCDHGC4Q9Y5F7 938 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 F5P12259 2224 aa12.64□□□□□ -0.39
EDC3-217ENST00000569606 KANSL1LA0AUZ9 987 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 GOLGA8MH3BSY2 632 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 RNF40O75150 1001 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 USP12O75317 370 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 PIGNO95427 931 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 POP4O95707 220 aaKnown RBP12.63□□□□□ -0.39
EDC3-217ENST00000569606 EPHX1P07099 455 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 MYBL2P10244 700 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 CHRNB1P11230 501 aa12.63□□□□□ -0.39
EDC3-217ENST00000569606 GRIA1P42261 906 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms