RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 TOR4AQ9NXH8 423 aa20.43■□□□□ 0.86
ABCA3-206ENST00000569062 ANAPC7Q9UJX3 599 aa20.43■□□□□ 0.86
ABCA3-206ENST00000569062 KLK13Q9UKR3 277 aa20.43■□□□□ 0.86
ABCA3-206ENST00000569062 NENFQ9UMX5 172 aa20.43■□□□□ 0.86
ABCA3-206ENST00000569062 ITM2BQ9Y287 266 aa20.43■□□□□ 0.86
ABCA3-206ENST00000569062 AKAP13Q12802 2813 aa20.43■□□□□ 0.86
ABCA3-206ENST00000569062 ARHGAP42A6NI28 874 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 SPINT1O43278 529 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 CBFA2T2O43439 604 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 AP1G1O43747 822 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 PRAMEF11O60813 436 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 PAK4O96013 591 aaPredicted RBP20.42■□□□□ 0.86
ABCA3-206ENST00000569062 HNRNPA2B1P22626 353 aaKnown RBP20.42■□□□□ 0.86
ABCA3-206ENST00000569062 EIF4A3P38919 411 aaKnown RBP20.42■□□□□ 0.86
ABCA3-206ENST00000569062 HCAR3P49019 387 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 CLDN2P57739 230 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 RPS21P63220 83 aaKnown RBP20.42■□□□□ 0.86
ABCA3-206ENST00000569062 OVGP1Q12889 678 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 BNIP3Q12983 259 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 DPYSQ14117 519 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 LRRC73Q5JTD7 316 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 AFMIDQ63HM1 303 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 SPECC1LQ69YQ0 1117 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 KIAA1161Q6NSJ0 714 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 ARHGAP36Q6ZRI8 547 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 TP53INP2Q8IXH6 220 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 SAP25Q8TEE9 199 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 HSPH1Q92598 858 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 KLHDC7BQ96G42 594 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 FEM1CQ96JP0 617 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 CDC6Q99741 560 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 OSBPL1AQ9BXW6 950 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 SLC17A9Q9BYT1 436 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 ERVMER34-1Q9H9K5 563 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 MFHAS1Q9Y4C4 1052 aa20.42■□□□□ 0.86
ABCA3-206ENST00000569062 CEP295Q9C0D2 2601 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 PTPRBP23467 1997 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 DFFAO00273 331 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 MAGEC1O60732 1142 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 TRIM16O95361 564 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 ATXN1LP0C7T5 689 aaKnown RBP20.41■□□□□ 0.86
ABCA3-206ENST00000569062 THEGLP0DJG4 465 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 RARAP10276 462 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 EPHA8P29322 1005 aaPredicted RBP20.41■□□□□ 0.86
ABCA3-206ENST00000569062 AKT2P31751 481 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 ARRB1P49407 418 aaPredicted RBP20.41■□□□□ 0.86
ABCA3-206ENST00000569062 RAD51Q06609 339 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 DPYSL2Q16555 572 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 GCNT7Q6ZNI0 430 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 RAB44Q7Z6P3 723 aaPredicted RBP20.41■□□□□ 0.86
ABCA3-206ENST00000569062 NIPA2Q8N8Q9 360 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 RAB7BQ96AH8 199 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.41■□□□□ 0.86
ABCA3-206ENST00000569062 IP6K2Q9UHH9 426 aa20.41■□□□□ 0.86
ABCA3-206ENST00000569062 COL5A1P20908 1838 aaPredicted RBP20.41■□□□□ 0.86
ABCA3-206ENST00000569062 GOLGA8CPA6NN73 597 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 C1QTNF9BB2RNN3 333 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 RAD51BO15315 384 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 TDRD6O60522 2096 aaKnown RBP20.4■□□□□ 0.86
ABCA3-206ENST00000569062 PIGNO95427 931 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 ITGAVP06756 1048 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 C1QTNF9P0C862 333 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 ITIH2P19823 946 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 AMPD1P23109 780 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 MAP1BP46821 2468 aaKnown RBP20.4■□□□□ 0.86
ABCA3-206ENST00000569062 RXRGP48443 463 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 ZNF135P52742 658 aaPredicted RBP20.4■□□□□ 0.86
ABCA3-206ENST00000569062 SLC25A11Q02978 314 aaKnown RBP20.4■□□□□ 0.86
ABCA3-206ENST00000569062 LRRK1Q38SD2 2015 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 BOLA3Q53S33 107 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 POLNQ7Z5Q5 900 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 TTC7BQ86TV6 843 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 VSTM4Q8IW00 320 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 OXR1Q8N573 874 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 OR13H1Q8NG92 308 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 ADAMTS14Q8WXS8 1223 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 DNAJC7Q99615 494 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 ETNK2Q9NVF9 386 aa20.4■□□□□ 0.86
ABCA3-206ENST00000569062 APOBEC2Q9Y235 224 aaKnown RBP20.4■□□□□ 0.86
ABCA3-206ENST00000569062 IGLON5A6NGN9 336 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 H3BRJ5 948 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 NEMP1O14524 444 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 YKT6O15498 198 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 TSPAN6O43657 245 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 RGRP47804 291 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 TRIM14Q14142 442 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 INAVAQ3KP66 663 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 CPNE8Q86YQ8 564 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 TSEN2Q8NCE0 465 aaKnown RBP20.39■□□□□ 0.85
ABCA3-206ENST00000569062 OR8K1Q8NGG5 319 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 ZNF564Q8TBZ8 553 aaPredicted RBP20.39■□□□□ 0.85
ABCA3-206ENST00000569062 BMFQ96LC9 184 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 TMEM121BQ9BXQ6 578 aaPredicted RBP20.39■□□□□ 0.85
ABCA3-206ENST00000569062 CALN1Q9BXU9 219 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 PACSIN1Q9BY11 444 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 CPEB1Q9BZB8 566 aaKnown RBP20.39■□□□□ 0.85
ABCA3-206ENST00000569062 CAAP1Q9H8G2 361 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 SP110Q9HB58 689 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 NEUROG3Q9Y4Z2 214 aa20.39■□□□□ 0.85
ABCA3-206ENST00000569062 PLXNB3Q9ULL4 1909 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms