RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 A0A0U1RQS6 177 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CBX4O00257 560 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MTSS1O43312 755 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SUN1O94901 812 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TOP3BO95985 862 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 LRG1P02750 347 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CKMP06732 381 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MMP2P08253 660 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 NMBRP28336 390 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MZF1P28698 734 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 CD86P42081 329 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 RGRP47804 291 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 KPNA1P52294 538 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 SARNPP82979 210 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 PTPRRQ15256 657 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SLC5A9Q2M3M2 681 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MROH9Q5TGP6 573 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MARC1Q5VT66 337 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 IL31Q6EBC2 164 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 PSRC1Q6PGN9 363 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 KLHDC10Q6PID8 442 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TPGS1Q6ZTW0 290 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 ZNF276Q8N554 614 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 C12orf76Q8N812 135 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 BCAS4Q8TDM0 211 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MZB1Q8WU39 189 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SLC44A1Q8WWI5 657 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 OVCA2Q8WZ82 227 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 ZSWIM3Q96MP5 696 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SMIM14Q96QK8 99 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 VAT1Q99536 393 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 PAIP2Q9BPZ3 127 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 FICDQ9BVA6 458 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TRABDQ9H4I3 376 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 XAB2Q9HCS7 855 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 CASS4Q9NQ75 786 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TLR9Q9NR96 1032 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHD9-217ENST00000565832 MOCS1Q9NZB8 636 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CDH22Q9UJ99 828 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 GRID1Q9ULK0 1009 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 PCDHA11Q9Y5I1 949 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 GBF1Q92538 1859 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MYLKQ15746 1914 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 E2F8A0AVK6 867 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CCL22O00626 93 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 NDC80O14777 642 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CACNG3O60359 315 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SNAP91O60641 907 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TBL1XO60907 577 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 NEBLO76041 1014 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 GLUD1P00367 558 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MT-CO1P00395 513 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 PRKCGP05129 697 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 IVLP07476 585 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MLNP12872 115 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 PRKCHP24723 683 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 HTR7P34969 479 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 RENBPP51606 427 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CDK16Q00536 496 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 GNA12Q03113 381 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 POU4F2Q12837 409 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 HNRNPDQ14103 355 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 PTPRCAPQ14761 206 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CRYMQ14894 314 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 COL19A1Q14993 1142 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SLC1A5Q15758 541 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 RNF219Q5W0B1 726 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 ADGRD2Q7Z7M1 963 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TAX1BP1Q86VP1 789 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 LRRC6Q86X45 466 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 TREML1Q86YW5 311 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 BBS7Q8IWZ6 715 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CARNMT1Q8N4J0 409 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 GSDMBQ8TAX9 411 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 RNF217Q8TC41 542 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 ATXN7L3BQ96GX2 97 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CEP295NLQ96MC4 621 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 FCRL5Q96RD9 977 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 CDK5RAP1Q96SZ6 601 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 FAM129BQ96TA1 746 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 LBHD1Q9BQE6 289 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 LINC00597Q9H2U6 94 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SP110Q9HB58 689 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MAN1C1Q9NR34 630 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 EIF2B3Q9NR50 452 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 INTS9Q9NV88 658 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 CFAP97Q9P2B7 532 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 PSMC3IPQ9P2W1 217 aaPredicted RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 DNMT3BQ9UBC3 853 aaKnown RBP6.31□□□□□ -1.4
CHD9-217ENST00000565832 SLC2A6Q9UGQ3 507 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 SLC24A2Q9UI40 661 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MIA3Q5JRA6 1907 aa6.31□□□□□ -1.4
CHD9-217ENST00000565832 MUC3AQ02505 3323 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.3□□□□□ -1.4
CHD9-217ENST00000565832 ZCWPW2A0A1B0GU75 182 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 WDR91A4D1P6 747 aa6.3□□□□□ -1.4
CHD9-217ENST00000565832 K7ERQ8 282 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms