RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GSDMAQ96QA5 445 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 DDA1Q9BW61 102 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 EDEM3Q9BZQ6 932 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 GOLPH3LQ9H4A5 285 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 LRIT1Q9P2V4 623 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 IL36AQ9UHA7 158 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 VPS28Q9UK41 221 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 TSPAN16Q9UKR8 245 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 FRMD4BQ9Y2L6 1034 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 FADS3Q9Y5Q0 445 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 MED13Q9UHV7 2174 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 CSMD1Q96PZ7 3565 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 TCAF2A6NFQ2 919 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 HNRNPRO43390 633 aaKnown RBP9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 DUX1O43812 170 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 GADD45BO75293 160 aaPredicted RBP9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 CPNE6O95741 557 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 MBD3O95983 291 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 SETSIPP0DME0 302 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 SRCP12931 536 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 ADRB3P13945 408 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 L1CAMP32004 1257 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 PEX5P50542 639 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 VAMP7P51809 220 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 HK3P52790 923 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 CLPPQ16740 277 aaPredicted RBP9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 DCAF12Q5T6F0 453 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 C16orf46Q6P387 395 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 OGFOD3Q6PK18 319 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 MACC1Q6ZN28 852 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 RD3Q7Z3Z2 195 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 TMPRSS9Q7Z410 1059 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 SPRED1Q7Z699 444 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 HID1Q8IV36 788 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 ATP6V0D2Q8N8Y2 350 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 GPR156Q8NFN8 814 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 CENPTQ96BT3 561 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 C1QTNF7Q9BXJ2 289 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 RMND1Q9NWS8 449 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 SLC39A1Q9NY26 324 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 KIAA1257Q9ULG3 409 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 PHTF1Q9UMS5 762 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 HS3ST2Q9Y278 367 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 MAP4K5Q9Y4K4 846 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 PCDHB3Q9Y5E6 796 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 OTOGQ6ZRI0 2925 aa9.2□□□□□ -0.94
VPS9D1-205ENST00000565452 SPENQ96T58 3664 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 LEFTY1O75610 366 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 FBXO21O94952 628 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 RHOBTB3O94955 611 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 RASGRP1O95267 797 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 MT-CO1P00395 513 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 NR1D1P20393 614 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 VARSP26640 1264 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 HTR1BP28222 390 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 OAS2P29728 719 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 CSTF2P33240 577 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 PPP1R2P41236 205 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 NOP2P46087 812 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 GCLMP48507 274 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 ARSDP51689 593 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 DPYDQ12882 1025 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 TRA2AQ13595 282 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 CUL4BQ13620 913 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 MAP9Q49MG5 647 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 ZC3H12AQ5D1E8 599 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 CERCAMQ5T4B2 595 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 CXorf57Q6NSI4 855 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 KDELC2Q7Z4H8 507 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 NLGN4XQ8N0W4 816 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 TTC13Q8NBP0 860 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 CHST14Q8NCH0 376 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 AGBL5Q8NDL9 886 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 NLGN4YQ8NFZ3 816 aaPredicted RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 GRIN3AQ8TCU5 1115 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 TAS1R2Q8TE23 839 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 ART4Q93070 314 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 TSACCQ96A04 125 aaPredicted RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 RAB7BQ96AH8 199 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 C2orf49Q9BVC5 232 aaPredicted RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 TRIT1Q9H3H1 467 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 SLC39A2Q9NP94 309 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 XPO7Q9UIA9 1087 aaKnown RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 PILRAQ9UKJ1 303 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 PNMA8BQ9ULN7 279 aaPredicted RBP9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 DAAM1Q9Y4D1 1078 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 OR51B4Q9Y5P0 310 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 B3GALT1Q9Y5Z6 326 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 DOCK9Q9BZ29 2069 aa9.19□□□□□ -0.94
VPS9D1-205ENST00000565452 KCNU1A8MYU2 1149 aa9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 K7EM74 188 aa9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 B4GAT1O43505 415 aa9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 NUDT21O43809 227 aaKnown RBP9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 KLRC4O43908 158 aa9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 F8P00451 2351 aa9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 TNFP01375 233 aa9.18□□□□□ -0.94
VPS9D1-205ENST00000565452 CELA2BP08218 269 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms