RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 C2orf49Q9BVC5 232 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SLC17A9Q9BYT1 436 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 DNAI2Q9GZS0 605 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 CAAP1Q9H8G2 361 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 MRPL40Q9NQ50 206 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 OLA1Q9NTK5 396 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 SIRPGQ9P1W8 387 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 STIM2Q9P246 746 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 COPG2Q9UBF2 871 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PILRAQ9UKJ1 303 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 NOL7Q9UMY1 257 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 HBS1LQ9Y450 684 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 KIF3AQ9Y496 699 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 NME7Q9Y5B8 376 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 PCDHGB7Q9Y5F8 929 aa5.88□□□□□ -1.47
ATXN3-245ENST00000556958 KLF2Q9Y5W3 355 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 OAS3Q9Y6K5 1087 aaKnown RBP5.88□□□□□ -1.47
ATXN3-245ENST00000556958 GOLGA8IPA6NC78 632 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 GOLGA8JA6NMD2 632 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 PP2D1A8MPX8 630 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 B4E171 279 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 PIK3R2O00459 728 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 TOR1BO14657 336 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 MCF2LO15068 1137 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 PPP6R2O75170 966 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 CPNE6O95741 557 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 RECKO95980 971 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 THBS1P07996 1170 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 TSPAN7P41732 249 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 STAT1P42224 750 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 NDST1P52848 882 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 METAP1P53582 386 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 TAS2R38P59533 333 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 EIF2B5Q13144 721 aaKnown RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 SLC12A1Q13621 1099 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 CDH18Q13634 790 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 MAP9Q49MG5 647 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 ACCSLQ4AC99 568 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 VWA2Q5GFL6 755 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 PITRM1Q5JRX3 1037 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 ATP1A1-AS1Q5TC04 95 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 JMJD6Q6NYC1 403 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 ACOT1Q86TX2 421 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 CDH24Q86UP0 819 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 GPBP1Q86WP2 473 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 WDR49Q8IV35 697 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 UNC45BQ8IWX7 931 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 NRSN1Q8IZ57 195 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 UNC5BQ8IZJ1 945 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 SYCP3Q8IZU3 236 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 CRYBG2Q8N1P7 616 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 GLIS1Q8NBF1 620 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 KYQ8NBH2 561 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 HJURPQ8NCD3 748 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 WFDC5Q8TCV5 224 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 RNF139Q8WU17 664 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 KCTD13Q8WZ19 329 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 JAKMIP2Q96AA8 810 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 LMLNQ96KR4 655 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 RPL10LQ96L21 214 aaKnown RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 LENG8Q96PV6 779 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 PPP1R9BQ96SB3 815 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 MMTAG2Q9BU76 263 aaKnown RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 SLC25A23Q9BV35 468 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 LRRC61Q9BV99 259 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 KIAA1586Q9HCI6 787 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 TIMMDC1Q9NPL8 285 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 INTS6Q9UL03 887 aaKnown RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 SARDHQ9UL12 918 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 G3BP2Q9UN86 482 aaKnown RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 ZNF451Q9Y4E5 1061 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 PCDHGA9Q9Y5G4 932 aaKnown RBP5.87□□□□□ -1.47
ATXN3-245ENST00000556958 MYOFQ9NZM1 2061 aa5.87□□□□□ -1.47
ATXN3-245ENST00000556958 ZFC3H1O60293 1989 aaKnown RBP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 TRIP11Q15643 1979 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 DENND4CQ5VZ89 1909 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 TMEM131Q92545 1883 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 TMEM200CA6NKL6 621 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 HHLA1C9JL84 531 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 LRRTM2O43300 516 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 GRID2O43424 1007 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 DYRK3O43781 588 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 PFKFB2O60825 505 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 KIF20AO95235 890 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 PDGFAP04085 211 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 P4HA1P13674 534 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CCDC130P13994 396 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 TNNI1P19237 187 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 AMPD1P23109 780 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 ADORA2BP29275 332 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 TXLNAP40222 546 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 PRPHP41219 470 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 SERPINB4P48594 390 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 ARSDP51689 593 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 PFN3P60673 137 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 YWHAGP61981 247 aaKnown RBP eCLIP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 YPEL5P62699 121 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 ERV3-1Q14264 604 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 EDRF1Q3B7T1 1238 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms