RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 C16orf46Q6P387 395 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 TRABD2AQ86V40 505 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 SLC17A6Q9P2U8 582 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 NAA20P61599 178 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 RPS24P62847 133 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 CHI3L2Q15782 390 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 PATL1Q86TB9 770 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 MTDHQ86UE4 582 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 ARL14EPQ8N8R7 260 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 OR7D4Q8NG98 312 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 THAP11Q96EK4 314 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 HMCESQ96FZ2 354 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 CASD1Q96PB1 797 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 MANSC1Q9H8J5 431 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 CHRAC1Q9NRG0 131 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 AP3B1O00203 1094 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 GMNNO75496 209 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 HOXC8P31273 242 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PPM1LQ5SGD2 360 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PRPF39Q86UA1 669 aaKnown RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PDZD8Q8NEN9 1154 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PSMG2Q969U7 264 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 C8orf48Q96LL4 319 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 SMOC2Q9H3U7 446 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 RABGEF1Q9UJ41 708 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 CCDC22O60826 627 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 CNTN5O94779 1100 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 LYNP07948 512 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 SERPINF2P08697 491 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 DEFB103AP81534 67 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 CENPIQ92674 756 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PPP1R14BQ96C90 147 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 MFSD3Q96ES6 412 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 SRPK1Q96SB4 655 aaKnown RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 CYP2S1Q96SQ9 504 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 TM6SF2Q9BZW4 377 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 DENND2DQ9H6A0 471 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 MTMR10Q9NXD2 777 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 RABL2BQ9UNT1 228 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 SCML2Q9UQR0 700 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 CLPTM1O96005 669 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 ENO1P06733 434 aaKnown RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 TACR2P21452 398 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 BGNP21810 368 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PPM1AP35813 382 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 GPX6P59796 221 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 SMARCB1Q12824 385 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 FBXL22Q6P050 247 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 DCUN1D5Q9BTE7 237 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 GRIP2Q9C0E4 1043 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 ELAC1Q9H777 363 aaKnown RBP16.75■□□□□ 0.27
PCNX1-209ENST00000554879 GLOD4Q9HC38 313 aa16.75■□□□□ 0.27
PCNX1-209ENST00000554879 PFDN6O15212 129 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 ADAM12O43184 909 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 UGT1A9O60656 530 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 RHOAP61586 193 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 ASPHQ12797 758 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 KHDC1Q4VXA5 237 aaKnown RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 THOC7Q6I9Y2 204 aaKnown RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 RBM44Q6ZP01 1051 aaKnown RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 NPWQ8N729 165 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 HSPBAP1Q96EW2 488 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 SPATA16Q9BXB7 569 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 UGT1A7Q9HAW7 530 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 UGT1A10Q9HAW8 530 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 UGT1A8Q9HAW9 530 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 WDR6Q9NNW5 1121 aaKnown RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 PHTF1Q9UMS5 762 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 MLLT6P55198 1093 aaPredicted RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 WNT3AP56704 352 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 BNIP1Q12981 228 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 SCD5Q86SK9 330 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 ICA1LQ8NDH6 482 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 GIPC3Q8TF64 312 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 ASIC4Q96FT7 647 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 CENPOQ9BU64 300 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 UBA2Q9UBT2 640 aaPredicted RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 APPL1Q9UKG1 709 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 TLR6Q9Y2C9 796 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 B2RBV5 119 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 GIPC1O14908 333 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 CCL16O15467 120 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 TBL1XO60907 577 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 FYNP06241 537 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 KCNJ11Q14654 390 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 TRIP4Q15650 581 aaPredicted RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 ZNF470Q6ECI4 717 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 HERC6Q8IVU3 1022 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 RTL3Q8N8U3 475 aaKnown RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 TLCD1Q96CP7 247 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 CERS2Q96G23 380 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 APOL5Q9BWW9 433 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 PNPLA8Q9NP80 782 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 TBC1D23Q9NUY8 699 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 UXTQ9UBK9 157 aaPredicted RBP16.74■□□□□ 0.27
PCNX1-209ENST00000554879 GRID1Q9ULK0 1009 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 WDR37Q9Y2I8 494 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 YIPF1Q9Y548 306 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms