RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 AP1G1O43747 822 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ZNF821O75541 412 aaPredicted RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 LEFTY1O75610 366 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ZMPSTE24O75844 475 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 PIAS2O75928 621 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 PCDH8O95206 1070 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 GP1BAP07359 652 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ALPPL2P10696 532 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 CKMT1AP12532 417 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ACTN2P35609 894 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 FLT3P36888 993 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 SERPINH1P50454 418 aaKnown RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 NEK3P51956 506 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 RNASE9P60153 205 aaKnown RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 DAB2P98082 770 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 RAPGEF1Q13905 1077 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 DRAP1Q14919 205 aaPredicted RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 AGERQ15109 404 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 MIIPQ5JXC2 388 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ARTNQ5T4W7 220 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 DPY19L2P1Q6NXN4 242 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 LINGO4Q6UY18 593 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 KYAT3Q6YP21 454 aaKnown RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 GCNT7Q6ZNI0 430 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 DPY19L3Q6ZPD9 716 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 TFAP2DQ7Z6R9 452 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 DCP2Q8IU60 420 aaKnown RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 SLC22A18ASQ8N1D0 253 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 FAM181AQ8N9Y4 354 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 CHST14Q8NCH0 376 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 OR13H1Q8NG92 308 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 OR7D4Q8NG98 312 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 MYOCQ99972 504 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 CALN1Q9BXU9 219 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ZYG11BQ9C0D3 744 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 RETREG1Q9H6L5 497 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 USP29Q9HBJ7 922 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ATP13A1Q9HD20 1204 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 FZD3Q9NPG1 666 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 NLGN3Q9NZ94 848 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 MPP6Q9NZW5 540 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ZNF212Q9UDV6 495 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 TMEM59LQ9UK28 342 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 ZFR2Q9UPR6 939 aaKnown RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 SNX10Q9Y5X0 201 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 HS3ST3A1Q9Y663 406 aa7.77□□□□□ -1.17
NEK3-201ENST00000550331 NYNRINQ9P2P1 1898 aaKnown RBP7.77□□□□□ -1.17
NEK3-201ENST00000550331 RNF103O00237 685 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 FFAR2O15552 330 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 LZTS3O60299 673 aaPredicted RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 BRINP1O60477 761 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 SRGAP2O75044 1071 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ENDOD1O94919 500 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 MT-CO3P00414 261 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 GIMD1P0DJR0 217 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ADRB3P13945 408 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 UCHL3P15374 230 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 L1CAMP32004 1257 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ETFBP38117 255 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 RABIFP47224 123 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 CCNHP51946 323 aaPredicted RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 GEMIN4P57678 1058 aaKnown RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 CLDN2P57739 230 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 HNRNPKP61978 463 aaKnown RBP eCLIP7.76□□□□□ -1.17
NEK3-201ENST00000550331 SNRPNP63162 240 aaKnown RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 RPS21P63220 83 aaKnown RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 ARF5P84085 180 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 NRG1Q02297 640 aaPredicted RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 GNA12Q03113 381 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 TLE3Q04726 772 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 TBC1D25Q3MII6 688 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 CARD16Q5EG05 197 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 KLHDC7AQ5VTJ3 777 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 TAF3Q5VWG9 929 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 CDCP2Q5VXM1 449 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 SEL1L3Q68CR1 1132 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 TRNP1Q6NT89 227 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 Q6ZSR6 202 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 NOP9Q86U38 636 aaKnown RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 PARGQ86W56 976 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 LURAP1LQ8IV03 231 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 SPACA3Q8IXA5 215 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 PRR7Q8TB68 274 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 EPS8L1Q8TE68 723 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ASB12Q8WXK4 309 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 KLK6Q92876 244 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 FGF11Q92914 225 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 RAB7BQ96AH8 199 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ISG20Q96AZ6 181 aaKnown RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 FEM1CQ96JP0 617 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 BMFQ96LC9 184 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 DEPDC7Q96QD5 511 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 HEPHQ9BQS7 1158 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 TUBGCP2Q9BSJ2 902 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 SPON2Q9BUD6 331 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 NAA15Q9BXJ9 866 aaKnown RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 SLC17A9Q9BYT1 436 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 TNKS2Q9H2K2 1166 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms