RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CAV1Q03135 178 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 ZBTB17Q13105 803 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 LAMB3Q13751 1172 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 C2orf27AQ580R0 203 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 NAPEPLDQ6IQ20 393 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 BRAT1Q6PJG6 821 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 Q6ZVU0 165 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 KBTBD6Q86V97 674 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 HOOK3Q86VS8 718 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 TP53INP2Q8IXH6 220 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 KLHL7Q8IXQ5 586 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 CAMKK1Q8N5S9 505 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 TXNDC5Q8NBS9 432 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 FLCNQ8NFG4 579 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 OR2T3Q8NH03 318 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 SORCS1Q8WY21 1168 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 PTPRN2Q92932 1015 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 RAB7BQ96AH8 199 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 IMP4Q96G21 291 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 MYO19Q96H55 970 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 SEMA3CQ99985 751 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 TM6SF2Q9BZW4 377 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 TSPYL1Q9H0U9 437 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 LRRC40Q9H9A6 602 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 FBRSL1Q9HCM7 1045 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 CD320Q9NPF0 282 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 CACNA2D2Q9NY47 1150 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 DKK3Q9UBP4 350 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 LHX3Q9UBR4 397 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 SLCO3A1Q9UIG8 710 aa9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 TPX2Q9ULW0 747 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-206ENST00000549274 EFCAB8A8MWE9 144 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 TTC34A8MYJ7 566 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 TNFRSF10AO00220 468 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SLC7A4O43246 635 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SMAD6O43541 496 aaKnown RBP9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SIN3BO75182 1162 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SLU7O95391 586 aaKnown RBP9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CD160O95971 181 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 DNTTP04053 509 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 ACADMP11310 421 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 HLA-DPA1P20036 260 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 C5AR1P21730 350 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CD72P21854 359 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 MCM3P25205 808 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 ADCY8P40145 1251 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 KCNJ1P48048 391 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 C2orf54Q08AI8 447 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 MESP2Q0VG99 397 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SEMA5AQ13591 1074 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CRY1Q16526 586 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 C9orf64Q5T6V5 341 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 ARMC12Q5T9G4 340 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 NAIF1Q69YI7 327 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 TTC27Q6P3X3 843 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 NCEH1Q6PIU2 408 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 GDPD4Q6W3E5 623 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 DPY19L3Q6ZPD9 716 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 JAMLQ86YT9 394 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 KLHDC8BQ8IXV7 354 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CCDC33Q8N5R6 958 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 OR2A12Q8NGT7 310 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CCDC110Q8TBZ0 833 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 PRCCQ92733 491 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SNF8Q96H20 258 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 FEM1CQ96JP0 617 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 NECAB3Q96P71 396 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 FAM118BQ9BPY3 351 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 CARD6Q9BX69 1037 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 RSPH9Q9H1X1 276 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 ZDHHC6Q9H6R6 413 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 RAB6BQ9NRW1 208 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 SMARCAL1Q9NZC9 954 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 NCKAP1Q9Y2A7 1128 aa9.88□□□□□ -0.83
SMARCD1-206ENST00000549274 TRIOO75962 3097 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 TECTAO75443 2155 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 CCDC163A0A0D9SF12 145 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 SHISA7A6NL88 538 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 K7ERQ8 282 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 BNIP3LO60238 219 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 ZNF217O75362 1048 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 APBB3O95704 486 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 AP2A1O95782 977 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 FGF1P05230 155 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 NFKB1P19838 968 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 TPSB2P20231 275 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 XPAP23025 273 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 PRKCHP24723 683 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 ITGB7P26010 798 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 PSMB4P28070 264 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 OXTRP30559 389 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 HOXA6P31267 233 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 MAGEA6P43360 314 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 GRIA4P48058 902 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 CXCL12P48061 93 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 EPHB1P54762 984 aa9.87□□□□□ -0.83
SMARCD1-206ENST00000549274 DRG2P55039 364 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms