RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ATL1Q8WXF7 558 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ATXN7L3BQ96GX2 97 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 TCF12Q99081 682 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 MXRA8Q9BRK3 442 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 TMEM246Q9BRR3 403 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 TTYH2Q9BSA4 534 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ZNF717Q9BY31 904 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 RTFDC1Q9BY42 306 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 HMG20AQ9NP66 347 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 FKBP14Q9NWM8 211 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 IL37Q9NZH6 218 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 WARS2Q9UGM6 360 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 PTBP2Q9UKA9 531 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 OAZ3Q9UMX2 235 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 AURKCQ9UQB9 309 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 PCP4L1A6NKN8 68 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 EI24O14681 340 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 HDAC3O15379 428 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 GPC4O75487 556 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 LTFP02788 710 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 UGT2B4P06133 528 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 NAGAP17050 411 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CBLP22681 906 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 FSHRP23945 695 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CD40LGP29965 261 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CD68P34810 354 aaPredicted RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 GARSP41250 739 aaKnown RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 NME5P56597 212 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CETN1Q12798 172 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TRIM25Q14258 630 aaKnown RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 KCNJ11Q14654 390 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 SLFN13Q68D06 897 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 CRTC3Q6UUV7 619 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 FKBP9P1Q75LS8 142 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TEX19Q8NA77 164 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TNIP2Q8NFZ5 429 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ELMO1Q92556 727 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 VPS33AQ96AX1 596 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ASB9Q96DX5 294 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 BTBD2Q9BX70 525 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.8□□□□□ -0.68
RTN3-208ENST00000537981 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 PCDHGC3Q9UN70 934 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CAB39Q9Y376 341 aaPredicted RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 ZHX2Q9Y6X8 837 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ARHGEF35A5YM69 484 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TMEM233B4DJY2 109 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TRIM38O00635 465 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 PHGDHO43175 533 aaKnown RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 PRMT3O60678 531 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CCNKO75909 580 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 CD4P01730 458 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 HTR1AP08908 422 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 IL7RP16871 459 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 OXTRP30559 389 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 SHMT2P34897 504 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 NUMBP49757 651 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 HK2P52789 917 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 DPY19L1Q2PZI1 675 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ZIK1Q3SY52 487 aaPredicted RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 PTPN20Q4JDL3 420 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ATAD3CQ5T2N8 411 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 NXNQ6DKJ4 435 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 DCUN1D2Q6PH85 259 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 HID1Q8IV36 788 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 SCML4Q8N228 414 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TDRD5Q8NAT2 981 aaKnown RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 ZFYVE19Q96K21 471 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 GPN2Q9H9Y4 310 aaPredicted RBP10.8□□□□□ -0.68
RTN3-208ENST00000537981 PRDM8Q9NQV8 689 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TMEM9Q9P0T7 183 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 COPG2Q9UBF2 871 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 HMGXB4Q9UGU5 601 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 VPS28Q9UK41 221 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 ANGPTL3Q9Y5C1 460 aa10.8□□□□□ -0.68
RTN3-208ENST00000537981 TNS1Q9HBL0 1735 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 PNMA6FA0A0J9YX94 578 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TMEM150BA6NC51 233 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 WDR64B1ANS9 1081 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 LILRB3O75022 631 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 GAP43P17677 238 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 PRKCHP24723 683 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 HOXA13P31271 388 aaPredicted RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 ETV3P41162 512 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 HARS2P49590 506 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 PSME3P61289 254 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 NOMO3P69849 1222 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 OCA2Q04671 838 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TRIM32Q13049 653 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 CTF1Q16619 201 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 CYBRD1Q53TN4 286 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 FAM205BPQ63HN1 556 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TBPL2Q6SJ96 375 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 SLFN12Q8IYM2 578 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 ARFGAP1Q8N6T3 406 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 FNIP1Q8TF40 1166 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms