RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PDCD11Q14690 1871 aaKnown RBP7.36□□□□□ -1.23
SVIP-204ENST00000530199 MUC22E2RYF6 1773 aaPredicted RBP7.36□□□□□ -1.23
SVIP-204ENST00000530199 EVPLQ92817 2033 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 ZMYM6O95789 1325 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 FLNCQ14315 2725 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 CHADO15335 359 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 IPO8O15397 1037 aaKnown RBP7.35□□□□□ -1.23
SVIP-204ENST00000530199 NDST3O95803 873 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 RHOP08100 348 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 XRCC6P12956 609 aaKnown RBP eCLIP7.35□□□□□ -1.23
SVIP-204ENST00000530199 CEBPBP17676 345 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 HK1P19367 917 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
SVIP-204ENST00000530199 GCSHP23434 173 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 MSX2P35548 267 aaPredicted RBP7.35□□□□□ -1.23
SVIP-204ENST00000530199 VIPR2P41587 438 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 NLRP11P59045 1033 aaKnown RBP7.35□□□□□ -1.23
SVIP-204ENST00000530199 FOXL1Q12952 345 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 TAF1BQ53T94 588 aaPredicted RBP7.35□□□□□ -1.23
SVIP-204ENST00000530199 CEP85Q6P2H3 762 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 ZDHHC24Q6UX98 284 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 SYT12Q8IV01 421 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 COLGALT2Q8IYK4 626 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 CACNA2D3Q8IZS8 1091 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 LINC01465Q8N7H1 131 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 SYT8Q8NBV8 401 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 MAGEB5Q9BZ81 275 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 SEMA4CQ9C0C4 833 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 VAT1LQ9HCJ6 419 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 OBP2BQ9NPH6 170 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 SLC9A2Q9UBY0 812 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 SLC30A1Q9Y6M5 507 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 DUSP10Q9Y6W6 482 aa7.35□□□□□ -1.23
SVIP-204ENST00000530199 ABCA7Q8IZY2 2146 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 KIF26AQ9ULI4 1882 aaPredicted RBP7.34□□□□□ -1.23
SVIP-204ENST00000530199 CNTNAP2Q9UHC6 1331 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 LRRK2Q5S007 2527 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 FAM234BA2RU67 622 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 SLC38A8A6NNN8 435 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 PODXLO00592 558 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 NPC1O15118 1278 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.23
SVIP-204ENST00000530199 SH3BP5O60239 455 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 GABRB3P28472 473 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 HOXD12P35452 270 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 CCT5P48643 541 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 ATXN3P54252 364 aaPredicted RBP7.34□□□□□ -1.23
SVIP-204ENST00000530199 ACTR2P61160 394 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 POU5F1BQ06416 359 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 DSC1Q08554 894 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 FCHO2Q0JRZ9 810 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 DCAF17Q5H9S7 520 aaPredicted RBP7.34□□□□□ -1.23
SVIP-204ENST00000530199 FBXO38Q6PIJ6 1188 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 TMC8Q8IU68 726 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 CFAP52Q8N1V2 620 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 GALNT15Q8N3T1 639 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 D2HGDHQ8N465 521 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 GLIS1Q8NBF1 620 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 PIGKQ92643 395 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 SMARCD2Q92925 531 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 MESP1Q9BRJ9 268 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 ETAA1Q9NY74 926 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 CDYLQ9Y232 598 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 TBC1D30Q9Y2I9 924 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 PRG3Q9Y2Y8 225 aaPredicted RBP7.34□□□□□ -1.23
SVIP-204ENST00000530199 UBIAD1Q9Y5Z9 338 aa7.34□□□□□ -1.23
SVIP-204ENST00000530199 NFASCO94856 1347 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 VWA8A3KMH1 1905 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 A0A087WZ62 844 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 WDR27A2RRH5 827 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 LGALS16A8MUM7 142 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 MAGEB2O15479 319 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 RRP8O43159 456 aaKnown RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 TRIM13O60858 407 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 VPS4BO75351 444 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 GJB3O75712 270 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 INMTO95050 263 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 APBB3O95704 486 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 PCP11498 1178 aaKnown RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 ACVR2AP27037 513 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 OR1G1P47890 313 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 TOB1P50616 345 aaPredicted RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 GPC3P51654 580 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 BOP1Q14137 746 aaKnown RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 SLC29A2Q14542 456 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 PON2Q15165 354 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 ZNF124Q15973 351 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 USP39Q53GS9 565 aaKnown RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 METRNLQ641Q3 311 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 TWF2Q6IBS0 349 aaKnown RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 TCTN3Q6NUS6 607 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 FUT10Q6P4F1 479 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 MRPL10Q7Z7H8 261 aaKnown RBP7.33□□□□□ -1.24
SVIP-204ENST00000530199 GAS2L3Q86XJ1 694 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 FUKQ8N0W3 1084 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 TMEM57Q8N5G2 664 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 ATG16L2Q8NAA4 619 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 CCDC150Q8NCX0 1101 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 MIEF2Q96C03 454 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 MARS2Q96GW9 593 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms