RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZNHIT6Q9NWK9 470 aaKnown RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 CWC15Q9P013 229 aaKnown RBP15.76■□□□□ 0.11
CAPN1-213ENST00000527897 IP6K2Q9UHH9 426 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 GGT7Q9UJ14 662 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 FADS3Q9Y5Q0 445 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 ACACBO00763 2458 aa15.76■□□□□ 0.11
CAPN1-213ENST00000527897 H3BRJ5 948 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 INSIG1O15503 277 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 PCDHGA12O60330 932 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 MAGEC1O60732 1142 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 PAK4O96013 591 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-213ENST00000527897 THEGLP0DJG4 465 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 XPAP23025 273 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-213ENST00000527897 ABL2P42684 1182 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 RPS21P63220 83 aaKnown RBP15.75■□□□□ 0.11
CAPN1-213ENST00000527897 TRIM14Q14142 442 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 ACAP1Q15027 740 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 TTC7BQ86TV6 843 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 SPATS2Q86XZ4 545 aaKnown RBP15.75■□□□□ 0.11
CAPN1-213ENST00000527897 PSTKQ8IV42 348 aaKnown RBP15.75■□□□□ 0.11
CAPN1-213ENST00000527897 NPWQ8N729 165 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 PAF1Q8N7H5 531 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 OR8K1Q8NGG5 319 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 CDC6Q99741 560 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 SLC17A9Q9BYT1 436 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 CTTNBP2NLQ9P2B4 639 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 LHX3Q9UBR4 397 aa15.75■□□□□ 0.11
CAPN1-213ENST00000527897 APOBEC2Q9Y235 224 aaKnown RBP15.75■□□□□ 0.11
CAPN1-213ENST00000527897 CEP295Q9C0D2 2601 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 IGLON5A6NGN9 336 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 MYO1FO00160 1098 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 PRAMEF11O60813 436 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 SDC3O75056 442 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 PALMO75781 387 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 TRIM16O95361 564 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 PIGNO95427 931 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 CYP1A2P05177 515 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 ATXN1LP0C7T5 689 aaKnown RBP15.74■□□□□ 0.11
CAPN1-213ENST00000527897 RARAP10276 462 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 AMPD1P23109 780 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 BNIP3Q12983 259 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 SGCGQ13326 291 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 KRT81Q14533 505 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 SHBQ15464 509 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 TMEM259Q4ZIN3 620 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 BOLA3Q53S33 107 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 CFAP58Q5T655 872 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 TXNRD3NBQ6F5E7 133 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 KIAA1161Q6NSJ0 714 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 DBX2Q6ZNG2 339 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 ARHGAP36Q6ZRI8 547 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 PTAR1Q7Z6K3 402 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-213ENST00000527897 IQCHQ86VS3 1027 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 ARHGAP12Q8IWW6 846 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 OXR1Q8N573 874 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 ZNF564Q8TBZ8 553 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-213ENST00000527897 CINPQ9BW66 212 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-213ENST00000527897 PDFQ9HBH1 243 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 FTSJ1Q9UET6 329 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 KLK13Q9UKR3 277 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 MFHAS1Q9Y4C4 1052 aa15.74■□□□□ 0.11
CAPN1-213ENST00000527897 TDRD6O60522 2096 aaKnown RBP15.74■□□□□ 0.11
CAPN1-213ENST00000527897 AP1G1O43747 822 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 AKR1B10O60218 316 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 ITIH2P19823 946 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 EPHA8P29322 1005 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-213ENST00000527897 ADKP55263 362 aaKnown RBP15.73■□□□□ 0.11
CAPN1-213ENST00000527897 OVGP1Q12889 678 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 DPYSQ14117 519 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 FGL2Q14314 439 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 DPYSL2Q16555 572 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 GCNT7Q6ZNI0 430 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 SLCO6A1Q86UG4 719 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 VSTM4Q8IW00 320 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 TP53INP2Q8IXH6 220 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 EID2Q8N6I1 236 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 TMEM145Q8NBT3 493 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 TSEN2Q8NCE0 465 aaKnown RBP15.73■□□□□ 0.11
CAPN1-213ENST00000527897 OR13H1Q8NG92 308 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 CTNNBL1Q8WYA6 563 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-213ENST00000527897 RAB7BQ96AH8 199 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 WRAP53Q9BUR4 548 aaKnown RBP15.73■□□□□ 0.11
CAPN1-213ENST00000527897 PACSIN1Q9BY11 444 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 WASF3Q9UPY6 502 aa15.73■□□□□ 0.11
CAPN1-213ENST00000527897 AKAP13Q12802 2813 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 TMEM110-MUSTN1A8MSY1 372 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 C1QTNF9BB2RNN3 333 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 RAD51BO15315 384 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 YKT6O15498 198 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 TSPAN6O43657 245 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 C1QTNF9P0C862 333 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 HNRNPH3P31942 346 aaKnown RBP15.72■□□□□ 0.11
CAPN1-213ENST00000527897 HCAR3P49019 387 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 ZNF135P52742 658 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-213ENST00000527897 CDH6P55285 790 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
CAPN1-213ENST00000527897 SLC18A3Q16572 532 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 HADHQ16836 314 aaKnown RBP15.72■□□□□ 0.11
CAPN1-213ENST00000527897 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 TMCO3Q6UWJ1 677 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms