RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PMS2P54278 862 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 LSM11P83369 360 aaKnown RBP eCLIP7.34□□□□□ -1.23
VCAN-207ENST00000507162 CENPCQ03188 943 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 CDK18Q07002 472 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 SLC12A1Q13621 1099 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 RAB41Q5JT25 222 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 CERCAMQ5T4B2 595 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 RAP1GAP2Q684P5 730 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 SMYD5Q6GMV2 418 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 JMJD6Q6NYC1 403 aaPredicted RBP7.34□□□□□ -1.23
VCAN-207ENST00000507162 ENPP7Q6UWV6 458 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 STXBP4Q6ZWJ1 553 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 BHLHA9Q7RTU4 235 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 CIR1Q86X95 450 aaPredicted RBP7.34□□□□□ -1.23
VCAN-207ENST00000507162 ATP11CQ8NB49 1132 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 XXYLT1Q8NBI6 393 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 CHST14Q8NCH0 376 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 OR2A12Q8NGT7 310 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 AZIN2Q96A70 460 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 CCDC114Q96M63 670 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 SLC25A23Q9BV35 468 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 C1QTNF2Q9BXJ5 285 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 TRIM55Q9BYV6 548 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 DNAI2Q9GZS0 605 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 TWSG1Q9GZX9 223 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 OLFML3Q9NRN5 406 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 FADS3Q9Y5Q0 445 aa7.34□□□□□ -1.23
VCAN-207ENST00000507162 CSPG4Q6UVK1 2322 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 RHPN2P1A8MT19 583 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 A8MU76 341 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 EIF3DO15371 548 aaKnown RBP eCLIP7.33□□□□□ -1.24
VCAN-207ENST00000507162 LRRTM2O43300 516 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 EXOC3O60645 756 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 ZG16O60844 167 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 LRCH4O75427 683 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 LEFTY1O75610 366 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 STK17BO94768 372 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 RASGRP1O95267 797 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 MT-CO1P00395 513 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 LCP1P13796 627 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 ADRB3P13945 408 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 TACR2P21452 398 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 DLSTP36957 453 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 DNA2P51530 1060 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 NEK3P51956 506 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 PLK1P53350 603 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 PER3P56645 1201 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 RAB15P59190 212 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 SRP54P61011 504 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 YPEL5P62699 121 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 DNM1Q05193 864 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 SRSF11Q05519 484 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 ADIGQ0VDE8 80 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 BIRC2Q13490 618 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 ZRSR2Q15696 482 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 C14orf28Q4W4Y0 310 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 CRTC2Q53ET0 693 aaPredicted RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 RILPL1Q5EBL4 403 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 SNAP47Q5SQN1 464 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 NKAIN2Q5VXU1 208 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 LINGO4Q6UY18 593 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 MACC1Q6ZN28 852 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 NYAP1Q6ZVC0 841 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 ZNF438Q7Z4V0 828 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 CHSY1Q86X52 802 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 NELFCDQ8IXH7 590 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 CCAR2Q8N163 923 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 SIX6OS1Q8N1H7 587 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 SH2D3CQ8N5H7 860 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 CISD2Q8N5K1 135 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 PLEKHO2Q8TD55 490 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 KCTD13Q8WZ19 329 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 SNRNP40Q96DI7 357 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 RTP4Q96DX8 246 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 PPP1R16AQ96I34 528 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 EPSTI1Q96J88 318 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 RANBP9Q96S59 729 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 PPP1R9BQ96SB3 815 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 SPRY4Q9C004 299 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 TRIT1Q9H3H1 467 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 DPEP2Q9H4A9 486 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 AGPAT3Q9NRZ7 376 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 ASF1BQ9NVP2 202 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 RCOR3Q9P2K3 495 aaPredicted RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 IL36AQ9UHA7 158 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 XPO7Q9UIA9 1087 aaKnown RBP7.33□□□□□ -1.24
VCAN-207ENST00000507162 VPS28Q9UK41 221 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 RPS6KL1Q9Y6S9 549 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 CROCCQ5TZA2 2017 aa7.33□□□□□ -1.24
VCAN-207ENST00000507162 MDC1Q14676 2089 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 LRRIQ3A6PVS8 624 aaPredicted RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 B4E171 279 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 K7ERQ8 282 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 PIK3R2O00459 728 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 ZW10O43264 779 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 NUDT21O43809 227 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 EIF5BO60841 1220 aaKnown RBP7.32□□□□□ -1.24
VCAN-207ENST00000507162 PPP6R2O75170 966 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 TNFP01375 233 aa7.32□□□□□ -1.24
VCAN-207ENST00000507162 IGLV3-27P01718 113 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms