RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 RACK1P63244 317 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 RIPPLY1Q0D2K3 151 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CDC20Q12834 499 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PRKAA1Q13131 559 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TFDP2Q14188 446 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 STARD3Q14849 445 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CHRNA2Q15822 529 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PLA2G4EQ3MJ16 856 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TYW3Q6IPR3 259 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ERICH5Q6P6B1 374 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 LACC1Q8IV20 430 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC9A9Q8IVB4 645 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM156AQ8NDB6 213 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SETD9Q8NE22 299 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 IP6K1Q92551 441 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 BCL7BQ9BQE9 202 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC25A23Q9BV35 468 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 BRD7Q9NPI1 651 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PCDHB16Q9NRJ7 776 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CATSPERZQ9NTU4 200 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC39A1Q9NY26 324 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 GLTPQ9NZD2 209 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SIRPGQ9P1W8 387 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PAK5Q9P286 719 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SEPT9Q9UHD8 586 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 MKLN1Q9UL63 735 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PCDHB4Q9Y5E5 795 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 N4BP2Q86UW6 1770 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ASTN2O75129 1339 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PRSS51A0A1B0GVH4 220 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 DENND3A2RUS2 1198 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 E5RJQ4 531 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TRIM13O60858 407 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 BCAS1O75363 584 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 APOA4P06727 396 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 APRTP07741 180 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF806P0C7X5 589 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 MLLT6P55198 1093 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 GPR85P60893 370 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 DUSP7Q16829 419 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PDZK1Q5T2W1 519 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 RNASEH2BQ5TBB1 312 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CHSY3Q70JA7 882 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CATSPER4Q7RTX7 472 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 IFNL2Q8IZJ0 200 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PIK3C3Q8NEB9 887 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 HSFY1Q96LI6 401 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 FUNDC2Q9BWH2 189 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PCIF1Q9H4Z3 704 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 KAT8Q9H7Z6 458 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 NANOGQ9H9S0 305 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC9A2Q9UBY0 812 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ADAM30Q9UKF2 790 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PNMA8BQ9ULN7 279 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SNX7Q9UNH6 387 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP2D7A0A087X1C5 515 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SH3D21A4FU49 640 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 NBNO60934 754 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF254O75437 659 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 HMGN1P05114 100 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 DHRS4L1P0CG22 281 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 S100A12P80511 92 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TNK2Q07912 1038 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CSTF3Q12996 717 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 GRM4Q14833 912 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 BTBD16Q32M84 506 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF404Q494X3 552 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CACHD1Q5VU97 1274 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PLET1Q6UQ28 207 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CHST15Q7LFX5 561 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PIWIL3Q7Z3Z3 882 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PLCZ1Q86YW0 608 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SGCDQ92629 289 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TFAP2CQ92754 450 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SH3KBP1Q96B97 665 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 PRRG3Q9BZD7 231 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 UCK2Q9BZX2 261 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 KCNN2Q9H2S1 579 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 MMP27Q9H306 513 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 IL1RL2Q9HB29 575 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TIGARQ9NQ88 270 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 TMLHEQ9NVH6 421 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 SMOXQ9NWM0 555 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 MBD2Q9UBB5 411 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ANAPC2Q9UJX6 822 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CROCCQ5TZA2 2017 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CST8O60676 142 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 KATNA1O75449 491 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 IVDP26440 423 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 RPL35P42766 123 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 HK2P52789 917 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CCDC85BQ15834 202 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 VPS72Q15906 364 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 HSD17B12Q53GQ0 312 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 RASSF6Q6ZTQ3 369 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms