RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZFR2Q9UPR6 939 aaKnown RBP13.42□□□□□ -0.26
HDAC3-213ENST00000492506 ENTPD2Q9Y5L3 495 aa13.42□□□□□ -0.26
HDAC3-213ENST00000492506 DOCK4Q8N1I0 1966 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 TCAF2A6NFQ2 919 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 CDRT15L2A8MXV6 281 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 KCNU1A8MYU2 1149 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 C1QTNF3-AMACRE9PGA6 284 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 F5H5T6 163 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 FANCGO15287 622 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 RASSF9O75901 435 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 SNUPNO95149 360 aaKnown RBP13.41□□□□□ -0.26
HDAC3-213ENST00000492506 TRUB2O95900 331 aaKnown RBP13.41□□□□□ -0.26
HDAC3-213ENST00000492506 APOEP02649 317 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 GPD2P43304 727 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 SYKP43405 635 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 CLDN2P57739 230 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 STILQ15468 1287 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 DPCR1Q3MIW9 517 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 ZNF542PQ5EBM4 170 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 TCERG1LQ5VWI1 586 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 HORMAD1Q86X24 394 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 SH2D3CQ8N5H7 860 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 MAPK15Q8TD08 544 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 ARRDC3Q96B67 414 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 ATXN7L3BQ96GX2 97 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 SH3GL2Q99962 352 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 ABCG4Q9H172 646 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 PCDHB4Q9Y5E5 795 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 PCDHGA8Q9Y5G5 932 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 AHCTF1Q8WYP5 2266 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 DOPEY2Q9Y3R5 2298 aa13.41□□□□□ -0.26
HDAC3-213ENST00000492506 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 NEMP2A6NFY4 417 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 AKR1B15C9JRZ8 316 aaPredicted RBP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 CASC3O15234 703 aaKnown RBP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 ALPPL2P10696 532 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 HNRNPA2B1P22626 353 aaKnown RBP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 FECHP22830 423 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 TRIM14Q14142 442 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 TMEM259Q4ZIN3 620 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 TTC39BQ5VTQ0 682 aaPredicted RBP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 FBXL22Q6P050 247 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 Q6ZSR6 202 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 EXD3Q8N9H8 876 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 LMO3Q8TAP4 145 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 GRAMD1AQ96CP6 724 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 BMFQ96LC9 184 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 DUSP23Q9BVJ7 150 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
HDAC3-213ENST00000492506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC3-213ENST00000492506 EFSO43281 561 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
HDAC3-213ENST00000492506 MT-CO1P00395 513 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF18P17022 549 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 RBMS1P29558 406 aaKnown RBP13.39□□□□□ -0.27
HDAC3-213ENST00000492506 AKT2P31751 481 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 CSRP3P50461 194 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
HDAC3-213ENST00000492506 OXCT1P55809 520 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 GNGT1P63211 74 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 CENPCQ03188 943 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDAC3-213ENST00000492506 CLN3Q13286 438 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 FGL2Q14314 439 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 FZD2Q14332 565 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 TAF5Q15542 800 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 CDKN3Q16667 212 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 ARL13BQ3SXY8 428 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 SEL1L3Q68CR1 1132 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 ZCCHC8Q6NZY4 707 aaKnown RBP13.39□□□□□ -0.27
HDAC3-213ENST00000492506 GUSBP11Q6P575 273 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 CNGA4Q8IV77 575 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 ATP6V0D2Q8N8Y2 350 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF548Q8NEK5 533 aaPredicted RBP13.39□□□□□ -0.27
HDAC3-213ENST00000492506 OR2A12Q8NGT7 310 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 RUFY1Q96T51 708 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 DNAJC28Q9NX36 388 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 SLC25A13Q9UJS0 675 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 HS3ST3A1Q9Y663 406 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 RELNP78509 3460 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 NBPF19A0A087WUL8 3843 aa13.39□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 SPTY2D1-AS1A0A0U1RR47 76 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 EME2A4GXA9 379 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 POM121BA6NF01 834 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 PMM2O15305 246 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 BNIP3LO60238 219 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 CSF2P04141 144 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 SRCP12931 536 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms