RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GNA14O95837 355 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 CELA2BP08218 269 aaPredicted RBP14.19□□□□□ -0.14
VARS-227ENST00000489979 HGFP14210 728 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 TSHRP16473 764 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 GKP32189 559 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 UGT1A5P35504 534 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 PPP1R2P41236 205 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 TGIF1Q15583 401 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 ARTNQ5T4W7 220 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 FAXCQ5TGI0 409 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 ZNF783Q6ZMS7 281 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 RAB11FIP2Q7L804 512 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 OR6K2Q8NGY2 324 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 RAB7BQ96AH8 199 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 CENPTQ96BT3 561 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 C1orf74Q96LT6 269 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 TBATAQ96M53 351 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 ARHGAP9Q9BRR9 750 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 CRACR2AQ9BSW2 395 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 FOXP3Q9BZS1 431 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 TM6SF2Q9BZW4 377 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 SYNCQ9H7C4 482 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 STARD5Q9NSY2 213 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 RRN3Q9NYV6 651 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.19□□□□□ -0.14
VARS-227ENST00000489979 GULP1Q9UBP9 304 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 ZNF212Q9UDV6 495 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 STAP1Q9ULZ2 295 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 CTNND2Q9UQB3 1225 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 SCN8AQ9UQD0 1980 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 TLN1Q9Y490 2541 aaKnown RBP14.19□□□□□ -0.14
VARS-227ENST00000489979 UNC13CQ8NB66 2214 aa14.19□□□□□ -0.14
VARS-227ENST00000489979 DOPEY2Q9Y3R5 2298 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 BICDL2A1A5D9 508 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 CD160O95971 181 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 IGFALSP35858 605 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 MARSP56192 900 aaKnown RBP14.18□□□□□ -0.14
VARS-227ENST00000489979 STX17P56962 302 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 SNX16P57768 344 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 APBA1Q02410 837 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 DEUP1Q05D60 604 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 SRSF1Q07955 248 aaKnown RBP eCLIP14.18□□□□□ -0.14
VARS-227ENST00000489979 EIF3IQ13347 325 aaKnown RBP14.18□□□□□ -0.14
VARS-227ENST00000489979 ZNF805Q5CZA5 627 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 TRIM65Q6PJ69 517 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 FOXR2Q6PJQ5 311 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 XKR5Q6UX68 686 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 ATG14Q6ZNE5 492 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 VPS36Q86VN1 386 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 RYBPQ8N488 228 aaPredicted RBP14.18□□□□□ -0.14
VARS-227ENST00000489979 CCDC74AQ96AQ1 378 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 PGAP3Q96FM1 320 aaPredicted RBP14.18□□□□□ -0.14
VARS-227ENST00000489979 FAM81BQ96LP2 452 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 TBCBQ99426 244 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 STRADBQ9C0K7 418 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 SIRPGQ9P1W8 387 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 RABGEF1Q9UJ41 708 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 HOOK1Q9UJC3 728 aaKnown RBP14.18□□□□□ -0.14
VARS-227ENST00000489979 DOLKQ9UPQ8 538 aa14.18□□□□□ -0.14
VARS-227ENST00000489979 UBR5O95071 2799 aaPredicted RBP14.18□□□□□ -0.14
VARS-227ENST00000489979 GOLGA6L4A6NEF3 574 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 D6RAR5 112 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 F9P00740 461 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 ITGB2P05107 769 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 ITGB6P18564 788 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 SLC9A1P19634 815 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 BMP6P22004 513 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 INHBCP55103 352 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 YPEL5P62699 121 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 CCL7P80098 99 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 GNA12Q03113 381 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 PPARDQ03181 441 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 TCEA2Q15560 299 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 LRRC73Q5JTD7 316 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 COLEC12Q5KU26 742 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 MACC1Q6ZN28 852 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 DRC7Q8IY82 874 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 SDR16C5Q8N3Y7 309 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 ARL10Q8N8L6 244 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 KYQ8NBH2 561 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 SHC3Q92529 594 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 NT5C3BQ969T7 300 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 GFM1Q96RP9 751 aaKnown RBP14.17□□□□□ -0.14
VARS-227ENST00000489979 CPEB1Q9BZB8 566 aaKnown RBP14.17□□□□□ -0.14
VARS-227ENST00000489979 ZYG11BQ9C0D3 744 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 PLCB1Q9NQ66 1216 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 MBNL1Q9NR56 388 aaKnown RBP14.17□□□□□ -0.14
VARS-227ENST00000489979 PAXBP1Q9Y5B6 917 aa14.17□□□□□ -0.14
VARS-227ENST00000489979 CHD5Q8TDI0 1954 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 A0A1W2PQM1 296 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 TMX2-CTNND1H3BSU7 103 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 AREL1O15033 823 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 SUV39H1O43463 412 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 MMP20O60882 483 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 RPLP0P05388 317 aaKnown RBP14.16□□□□□ -0.14
VARS-227ENST00000489979 UGT2B4P06133 528 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 FAM87AP0C7U9 286 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 KRT9P35527 623 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 ACVRL1P37023 503 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms