RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 MT-CO1P00395 513 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 STAT5AP42229 794 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 CCL11P51671 97 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 PLK1P53350 603 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 RAB15P59190 212 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 CENPCQ03188 943 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 CDK18Q07002 472 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 ADIGQ0VDE8 80 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 HLTFQ14527 1009 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 ALG11Q2TAA5 492 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 NKAIN2Q5VXU1 208 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 TAF8Q7Z7C8 310 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 CISD2Q8N5K1 135 aaKnown RBP12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 FAM184AQ8NB25 1140 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 XXYLT1Q8NBI6 393 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 PPP1R16AQ96I34 528 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 TRIT1Q9H3H1 467 aaKnown RBP12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 LRRC4Q9HBW1 653 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 MBNL1Q9NR56 388 aaKnown RBP12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 IL36AQ9UHA7 158 aa12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
ATPAF1-205ENST00000487193 DCHS2Q6V1P9 2916 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 PIPSLA2A3N6 862 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 LRRIQ3A6PVS8 624 aaPredicted RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 B4E171 279 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 K7ERQ8 282 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 NUDT21O43809 227 aaKnown RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 LRCH4O75427 683 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 FAM155BO75949 473 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 ENDOD1O94919 500 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 SRCP12931 536 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 ITGA3P26006 1051 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 CD1CP29017 333 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 PTGER4P35408 488 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 TSPAN7P41732 249 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 NOP2P46087 812 aaKnown RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 PER3P56645 1201 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 SLC8A3P57103 927 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 INCA1Q0VD86 236 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 SEMA5AQ13591 1074 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 TRA2AQ13595 282 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 SMTNL2Q2TAL5 461 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 RILPL1Q5EBL4 403 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 APLFQ8IW19 511 aaPredicted RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 ATP11CQ8NB49 1132 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 DENND6BQ8NEG7 585 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 TATDN2Q93075 761 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 FCRL2Q96LA5 508 aaPredicted RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 TEFMQ96QE5 360 aaKnown RBP12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 TNKS2Q9H2K2 1166 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 DPEP2Q9H4A9 486 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 AGPAT3Q9NRZ7 376 aa12.36□□□□□ -0.43
ATPAF1-205ENST00000487193 RHPN2P1A8MT19 583 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 EIF3DO15371 548 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 PRICKLE3O43900 615 aaPredicted RBP12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 LCP1P13796 627 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 CD99P14209 185 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 TACR2P21452 398 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 HDAC4P56524 1084 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 KRTAP10-9P60411 292 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 SRP54P61011 504 aaKnown RBP12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 GLIS1Q8NBF1 620 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 ALG14Q96F25 216 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 MDFIQ99750 246 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 FEM1AQ9BSK4 669 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 APMAPQ9HDC9 416 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 TMEM9Q9P0T7 183 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 COPG2Q9UBF2 871 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 VPS28Q9UK41 221 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 ITM2BQ9Y287 266 aa12.35□□□□□ -0.43
ATPAF1-205ENST00000487193 CHD5Q8TDI0 1954 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 ZSCAN5CA6NGD5 496 aaPredicted RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 A8MU76 341 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 PIK3R2O00459 728 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 SMAD6O43541 496 aaKnown RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 EIF5BO60841 1220 aaKnown RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 TNFP01375 233 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 RRM1P23921 792 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 L1CAMP32004 1257 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 AP3M2P53677 418 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 DNM1Q05193 864 aaKnown RBP12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 NNTQ13423 1086 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 CPZQ66K79 652 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 SLC6A19Q695T7 634 aa12.34□□□□□ -0.43
ATPAF1-205ENST00000487193 SPECC1LQ69YQ0 1117 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms