RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CLPBQ9H078 707 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ABCG8Q9H221 673 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 HIPK3Q9H422 1215 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 COL4A5P29400 1685 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 MOXD2PA6NHM9 499 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 CHRNA1P02708 482 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 INHAP05111 366 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 TPBGLP0DKB5 382 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 RGS4P49798 205 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 PTK2BQ14289 1009 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 POM121L1PQ3SYA9 428 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 CACUL1Q86Y37 369 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-216ENST00000486741 KYQ8NBH2 561 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ZNF333Q96JL9 665 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 PCDHB9Q9Y5E1 797 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 OR51F1A6NGY5 319 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 KCNU1A8MYU2 1149 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 IRAK2O43187 625 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 E2F6O75461 281 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 HIST1H2AGP0C0S8 130 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 HIST1H2ADP20671 130 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 CDK18Q07002 472 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 DCBLD1Q8N8Z6 715 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 SNX31Q8N9S9 440 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 HIST1H2AHQ96KK5 128 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 HIST1H2AJQ99878 128 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 H2AFJQ9BTM1 129 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 RHOJQ9H4E5 214 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 NEMP2A6NFY4 417 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 FAM189A1O60320 539 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 ITGB1P05556 798 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 IKBKEQ14164 716 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 TBCCQ15814 346 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PTPRNQ16849 979 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 ARCQ7LC44 396 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 SLC9A7Q96T83 725 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PCDHGC4Q9Y5F7 938 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PRKCGP05129 697 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 SELPP16109 830 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 KPNA1P52294 538 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 STX5Q13190 355 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 NAB1Q13506 487 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 MAP7Q14244 749 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 LPIN1Q14693 890 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 C6orf89Q6UWU4 347 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 SAPCD2Q86UD0 394 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 FBXO39Q8N4B4 442 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PNPLA1Q8N8W4 532 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 RBM15BQ8NDT2 890 aaKnown RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 TSPAN18Q96SJ8 248 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 RBBP8Q99708 897 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 DRC3Q9H069 523 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PRDM16Q9HAZ2 1276 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 CASS4Q9NQ75 786 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 TAS2R13Q9NYV9 303 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 ITM2AO43736 263 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PAX7P23759 505 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 AIF1P55008 147 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 SZRD1Q7Z422 152 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 GSTCDQ8NEC7 633 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 TRPC4APQ8TEL6 797 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 CCDC126Q96EE4 140 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 BTN2A3PQ96KV6 586 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 CATSPERZQ9NTU4 200 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
HMGN1-216ENST00000486741 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-216ENST00000486741 TBL1XO60907 577 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ATP6V1B1P15313 513 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 RPS24P62847 133 aaKnown RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SLC10A7Q0GE19 358 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 WASHC2DQ5SRD0 308 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 POTEHQ6S545 545 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 OR10T2Q8NGX3 314 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SNX19Q92543 992 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ACOX2Q99424 681 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 FAM124BQ9H5Z6 455 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SYTL2Q9HCH5 934 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SLC2A6Q9UGQ3 507 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ZNF180Q9UJW8 692 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SNX13Q9Y5W8 968 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 J3KR12 359 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms