RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 WASH3PC4AMC7 463 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 RIPK2O43353 540 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 TCEA3O75764 348 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 MT-CYBP00156 380 aaPredicted RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 MT-CO1P00395 513 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 SRCP12931 536 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 POLR2EP19388 210 aaKnown RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 HLA-DPA1P20036 260 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 HSD17B3P37058 310 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 OPRD1P41143 372 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 LMAN1P49257 510 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 EIF3BP55884 814 aaKnown RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 WNT3AP56704 352 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 RPL26P61254 145 aaKnown RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 MSLNQ13421 630 aaPredicted RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 IHHQ14623 411 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 GEN1Q17RS7 908 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 MSS51Q4VC12 460 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 MBLAC2Q68D91 279 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 NCEH1Q6PIU2 408 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 NUDT18Q6ZVK8 323 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 SPATA22Q8NHS9 363 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 EDAQ92838 391 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 DNASE1L2Q92874 299 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 PEX13Q92968 403 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 MRGPRX3Q96LB0 322 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 TUBGCP5Q96RT8 1024 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 TRIB3Q96RU7 358 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 EBNA1BP2Q99848 306 aaKnown RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 SEMA3CQ99985 751 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 CDC42EP4Q9H3Q1 356 aaKnown RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 SEMA4AQ9H3S1 761 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 PPCSQ9HAB8 311 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC25A13Q9UJS0 675 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 RPL26L1Q9UNX3 145 aaKnown RBP14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 TRIOO75962 3097 aa14.43□□□□□ -0.1
SHMT1P1-201ENST00000419974 A0A1W2PQ67 120 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 FZD6O60353 706 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 SOCS5O75159 536 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 CA4P22748 312 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 GDI1P31150 447 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 DSC2Q02487 901 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 PDIA2Q13087 525 aaKnown RBP14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 LAMB3Q13751 1172 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 RASA2Q15283 850 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 GRAMD4Q6IC98 578 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 CROCCP2Q86T23 111 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 C12orf40Q86WS4 652 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 AGGF1Q8N302 714 aaeCLIP14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 TERB1Q8NA31 727 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 OR2AP1Q8NGE2 309 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 PYROXD1Q8WU10 500 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 FRS2Q8WU20 508 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 CHFRQ96EP1 664 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 MYO19Q96H55 970 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 LRIG1Q96JA1 1093 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 ZFYVE19Q96K21 471 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 PWWP2AQ96N64 755 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 RANBP9Q96S59 729 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 TBL1YQ9BQ87 522 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 KXD1Q9BQD3 176 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 WDR83Q9BRX9 315 aaKnown RBP14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 RPP25Q9BUL9 199 aaKnown RBP14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 NOD2Q9HC29 1040 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 MRM3Q9HC36 420 aaKnown RBP14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 LRRC4CQ9HCJ2 640 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 SAYSD1Q9NPB0 183 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 ELOVL2Q9NXB9 296 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 NINJ2Q9NZG7 142 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 BFARQ9NZS9 450 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 RIMKLBQ9ULI2 386 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 ERVW-1Q9UQF0 538 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 NFS1Q9Y697 457 aa14.42□□□□□ -0.1
SHMT1P1-201ENST00000419974 C2CD4DB7Z1M9 353 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 GOLGA8MH3BSY2 632 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 HTRA2O43464 458 aaPredicted RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 FGF1P05230 155 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 C7P10643 843 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 PSMA3P25788 255 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 NNMTP40261 264 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 CD86P42081 329 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 GRIA1P42261 906 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 GRIA2P42262 883 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 RGRP47804 291 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 MAXP61244 160 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 RHOAP61586 193 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SNRPD1P62314 119 aaKnown RBP14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 CDK18Q07002 472 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ENPP2Q13822 863 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SLC1A5Q15758 541 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 PTPRNQ16849 979 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 DGKKQ5KSL6 1271 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 STEAP4Q687X5 459 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 LINGO4Q6UY18 593 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 SRLQ86TD4 932 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 TMEM135Q86UB9 458 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ZBED8Q8IZ13 594 aa14.41□□□□□ -0.1
SHMT1P1-201ENST00000419974 ATP11CQ8NB49 1132 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms