RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 FUT4P22083 530 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 SLC1A2P43004 574 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 ENTPD1P49961 510 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 STX1BP61266 288 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 TAZQ16635 292 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 SGO1Q5FBB7 561 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 KBTBD6Q86V97 674 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 GABPB2Q8TAK5 448 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-202ENST00000375597 SH3RF2Q8TEC5 729 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 THAP11Q96EK4 314 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 SMIM14Q96QK8 99 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 RTKNQ9BST9 563 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 EBF1Q9UH73 591 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 SHROOM3Q8TF72 1996 aa11.92□□□□□ -0.5
MCF2L-202ENST00000375597 F8W810 466 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 KCNH1O95259 989 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 PGK1P00558 417 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 CD68P34810 354 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 ADRA1BP35368 520 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 APLP1P51693 650 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 SNX16P57768 344 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 YBX1P67809 324 aaKnown RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 CCNA1P78396 465 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 PIGFQ07326 219 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 PFKFB4Q16877 469 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 LIPMQ5VYY2 423 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 TMEM110Q86TL2 294 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 RALGPS2Q86X27 583 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 SNX29P2Q8IUI4 249 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 WNT8BQ93098 351 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 RBPJLQ9UBG7 517 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 ARHGAP10A1A4S6 786 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 KLHL33A6NCF5 533 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 PRORSD1PA6NEY8 169 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 GRID2O43424 1007 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 SMIM18P0DKX4 95 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 GABRB3P28472 473 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 BRCC3P46736 316 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 PIK3CGP48736 1102 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 TAF6P49848 677 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 NRG1Q02297 640 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 LSAMPQ13449 338 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 CCDC153Q494R4 210 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 FASTKD5Q7L8L6 764 aaKnown RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 MILR1Q7Z6M3 343 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 SIKE1Q9BRV8 207 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 PCDH12Q9NPG4 1184 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 DNAJC28Q9NX36 388 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 DGKBQ9Y6T7 804 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 ZNF195O14628 629 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 B3GAT3O94766 335 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 CPB1P15086 417 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 ALDH4A1P30038 563 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 SLC5A2P31639 672 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 ATICP31939 592 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 NR2C2P49116 596 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 SLC25A52Q3SY17 297 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 AAGABQ6PD74 315 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 RIOX2Q8IUF8 465 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 TRPC4APQ8TEL6 797 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 NSUN5Q96P11 429 aaKnown RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 TMEM30AQ9NV96 361 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 OXSMQ9NWU1 459 aa11.91□□□□□ -0.5
MCF2L-202ENST00000375597 RBMX2Q9Y388 322 aaKnown RBP11.91□□□□□ -0.5
MCF2L-202ENST00000375597 CDH23Q9H251 3354 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ZCWPW2A0A1B0GU75 182 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 MATN2O00339 956 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 TRMUO75648 421 aaKnown RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 FBXO21O94952 628 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 MYCP01106 439 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 SLC35E2BP0CK96 405 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ZNF23P17027 643 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ITGB6P18564 788 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 PROZP22891 400 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 NDST2P52849 883 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 SLC5A3P53794 718 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 NAA20P61599 178 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 PRKAA1Q13131 559 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 TBC1D25Q3MII6 688 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 SPANXN3Q5MJ09 141 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 RMND5BQ96G75 393 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 FRMD8Q9BZ67 464 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 NAA50Q9GZZ1 169 aaKnown RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 LTB4R2Q9NPC1 389 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ATXN10Q9UBB4 475 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 IGKV6D-21A0A0A0MT36 114 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 HEATR9A2RTY3 570 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 TOR1BO14657 336 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 TIMM44O43615 452 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ATP6V1G1O75348 118 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms