RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 POMPQ9Y244 141 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 AK5Q9Y6K8 562 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 ARHGAP42A6NI28 874 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 INPPL1O15357 1258 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 LILRB3O75022 631 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 CBFA2T3O75081 653 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 LRCH4O75427 683 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 RFPL2O75678 378 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 EDN1P05305 212 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TFAP2AP05549 437 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 SRGAP2CP0DJJ0 459 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 SMIM18P0DKX4 95 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ETS1P14921 441 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 HADHAP40939 763 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ALDH1A3P47895 512 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 PSMD8P48556 350 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ZNF143P52747 638 aaPredicted RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 NRLP54845 237 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 NUP107P57740 925 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TBL3Q12788 808 aaKnown RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 SIM2Q14190 667 aaPredicted RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 PTPN20Q4JDL3 420 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 AASDHQ4L235 1098 aaPredicted RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 SFT2D3Q587I9 215 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 DENND1BQ6P3S1 775 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 RSPO2Q6UXX9 243 aaPredicted RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TTC7BQ86TV6 843 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TRIM74Q86UV6 250 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TRIM73Q86UV7 250 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 RFX6Q8HWS3 928 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 KIAA0319LQ8IZA0 1049 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 CPSF7Q8N684 471 aaKnown RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 RNF169Q8NCN4 708 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 HM13Q8TCT9 377 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TFAP2BQ92481 460 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ZNF707Q96C28 371 aaPredicted RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ITPKCQ96DU7 683 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 DUS3LQ96G46 650 aaKnown RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 TMEM176AQ96HP8 235 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 CNPY3Q9BT09 278 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 EMILIN2Q9BXX0 1053 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 CDT1Q9H211 546 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 POPDC2Q9HBU9 364 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 VPS45Q9NRW7 570 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 KLHL11Q9NVR0 708 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 MOCS1Q9NZB8 636 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ZC3H7BQ9UGR2 993 aaKnown RBP13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 WDR37Q9Y2I8 494 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 RALGAPA1Q6GYQ0 2036 aa13.06□□□□□ -0.32
CHCHD1-202ENST00000372837 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.322e-8■■■■■ 46.8
CHCHD1-202ENST00000372837 GOLGA8SH3BPF8 625 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 INO80B-WBP1J3KQ70 363 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 DPYSL4O14531 572 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 VILLO15195 856 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 PFDN1O60925 122 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 CILPO75339 1184 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 TRUB2O95900 331 aaKnown RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 TOP3BO95985 862 aaKnown RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 APOA4P06727 396 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 MX2P20592 715 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 GPD1P21695 349 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 RFC1P35251 1148 aaPredicted RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 NR2C2P49116 596 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 KDSRQ06136 332 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 FOXC1Q12948 553 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 SF3A2Q15428 464 aaKnown RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 TRIP10Q15642 601 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 ATP13A4Q4VNC1 1196 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 TEDDM1Q5T9Z0 273 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 MBLAC2Q68D91 279 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 PSAPL1Q6NUJ1 521 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 ZNF554Q86TJ5 538 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 ZDHHC17Q8IUH5 632 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 UNC5BQ8IZJ1 945 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 RP9Q8TA86 221 aaKnown RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 PPP1R14CQ8TAE6 165 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 SLC26A7Q8TE54 656 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 SMG7Q92540 1137 aaKnown RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 SGF29Q96ES7 293 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 PPP1R16BQ96T49 567 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 OSMRQ99650 979 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 EBNA1BP2Q99848 306 aaKnown RBP13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 ADPGKQ9BRR6 497 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 PALMDQ9NP74 551 aa13.05□□□□□ -0.32
CHCHD1-202ENST00000372837 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms