RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 COL15A1P39059 1388 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 FAM240BA0A1B0GVZ2 78 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 F5H423 210 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 GJB6O95452 261 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CYP2F1P24903 491 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RAB27AP51159 221 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 USP46P62068 366 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CCNIQ14094 377 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CYP2A13Q16696 494 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 VMACQ2NL98 169 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 QRICH1Q2TAL8 776 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 IER5Q5VY09 327 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SWSAP1Q6NVH7 229 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 NCCRP1Q6ZVX7 275 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 HEXDCQ8WVB3 486 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PPP1R14AQ96A00 147 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM159Q96B96 161 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 BIRC8Q96P09 236 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 FAIM2Q9BWQ8 316 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PTPRUQ92729 1446 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RRN3P2A6NIE6 340 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 HDAC3O15379 428 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 FABP3P05413 133 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MYL3P08590 195 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ELK3P41970 407 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ARPP19P56211 112 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 RAB5BP61020 215 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ALDH16A1Q8IZ83 802 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 C9orf43Q8TAL5 461 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 NR4A3Q92570 626 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 GPATCH1Q9BRR8 931 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PTGFRNQ9P2B2 879 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CHKBQ9Y259 395 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 GIT1Q9Y2X7 761 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MAB21L2Q9Y586 359 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 A0A087X0T9 212 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PRAMEF33A0A0G2JMD5 474 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 KBTBD13C9JR72 458 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 BCKDKO14874 412 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PRAMEF10O60809 474 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CPSF4O95639 269 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ENO2P09104 434 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 COX7A2P14406 83 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 GPR1P46091 355 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CNPY1Q3B7I2 92 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ANGEL2Q5VTE6 544 aaKnown RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 DYNLL2Q96FJ2 89 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM121Q9BTD3 319 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 OXCT2Q9BYC2 517 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CST11Q9H112 138 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 LGALS13Q9UHV8 139 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MYMKA6NI61 221 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 RP2O75695 350 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 VNN2O95498 520 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 TDP2O95551 362 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 CYP1A2P05177 515 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 ERVK-10P10266 1014 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 HTR7P34969 479 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 SLC26A2P50443 739 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 RORCP51449 518 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 ARMC8Q8IUR7 673 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 BCL7BQ9BQE9 202 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 A0A096LPK6 155 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L10C9JJH3 530 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 FOXN1O15353 648 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 ATMINO43313 823 aaPredicted RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 CASP1P29466 404 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 RPL10AP62906 217 aaKnown RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 FOXD4Q12950 439 aaPredicted RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 CYP2R1Q6VVX0 501 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 NECAB2Q7Z6G3 386 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 ADAMTSL2Q86TH1 951 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 SYT12Q8IV01 421 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 FSTL5Q8N475 847 aaPredicted RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 RNF149Q8NC42 400 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 NXNL1Q96CM4 212 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 NMRK2Q9NPI5 230 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 LRRC4BQ9NT99 713 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 RBAK-RBAKDNI3L0D1 243 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 SCELO95171 688 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 PEX6Q13608 980 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 PDIA6Q15084 440 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 SMTNL2Q2TAL5 461 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 ADNP2Q6IQ32 1131 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 IL27RAQ6UWB1 636 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 SEMA4AQ9H3S1 761 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 UNKLQ9H9P5 680 aaKnown RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 EXD2Q9NVH0 621 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 FOXN3O00409 490 aaPredicted RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 BNIP3LO60238 219 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 ATP5F1P24539 256 aaPredicted RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 RGS1Q08116 209 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 PCSK7Q16549 785 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 FNBP1LQ5T0N5 605 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 YAF2Q8IY57 180 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 HS6ST3Q8IZP7 471 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 POMGNT2Q8NAT1 580 aa5.56□□□□□ -1.52
PTPRB-202ENST00000334414 DNAJA4Q8WW22 397 aaPredicted RBP5.56□□□□□ -1.52
PTPRB-202ENST00000334414 FAM126AQ9BYI3 521 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms