RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 TCF12Q99081 682 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 MLPHQ9BV36 600 aaPredicted RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 CXCL16Q9H2A7 254 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CXorf21Q9HAI6 301 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 NCKIPSDQ9NZQ3 722 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 AURKCQ9UQB9 309 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 TNS1Q9HBL0 1735 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 BPTFQ12830 3046 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 UBDO15205 165 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 PGK1P00558 417 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CYP2C8P10632 490 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 UGT1A6P19224 532 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 MATKP42679 507 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CSRP3P50461 194 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 SLC7A2P52569 658 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 NME3Q13232 169 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 FRG1Q14331 258 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 MAP7D1Q3KQU3 841 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 SAMD4BQ5PRF9 694 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 GPR107Q5VW38 600 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 RPS27LQ71UM5 84 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 CEP97Q8IW35 865 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 OR9I1Q8NGQ6 314 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 SPPL2BQ8TCT7 592 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 VPS50Q96JG6 964 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 TUBA8Q9NY65 449 aaPredicted RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 CD300AQ9UGN4 299 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CROTQ9UKG9 612 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 A0A1W2PPW3 197 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 KANSL1LA0AUZ9 987 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 FAM149AA5PLN7 773 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 H3BMQ9 156 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 TPST1O60507 370 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 STAU1O95793 577 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 MT-CO1P00395 513 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 AHSGP02765 367 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 YBX3P16989 372 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNX20-202ENST00000330943 NFKB1P19838 968 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CYP2B6P20813 491 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 GABRB3P28472 473 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 LRPAP1P30533 357 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 BCAT1P54687 386 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 PFKPQ01813 784 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 SQLEQ14534 574 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 PAFAH1B3Q15102 231 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 SLC25A52Q3SY17 297 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 FAM219BQ5XKK7 198 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 XKR5Q6UX68 686 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 LYSMD3Q7Z3D4 306 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 TNIP2Q8NFZ5 429 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 COX4I2Q96KJ9 171 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 C12orf42Q96LP6 360 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 COG8Q96MW5 612 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 OSBPL2Q9H1P3 480 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 CYP4F12Q9HCS2 524 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 SLC38A7Q9NVC3 462 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 HOXC10Q9NYD6 342 aa14.59□□□□□ -0.07
SNX20-202ENST00000330943 POLR2AP24928 1970 aaKnown RBP14.59□□□□□ -0.07
SNX20-202ENST00000330943 DOCK1Q14185 1865 aa14.58□□□□□ -0.07
SNX20-202ENST00000330943 CLIC3O95833 236 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 SNRPB2P08579 225 aaKnown RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 ATP6V1B2P21281 511 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 FUT4P22083 530 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 CD68P34810 354 aaPredicted RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 CTBP1Q13363 440 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 KCTD11Q693B1 232 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 ERMP1Q7Z2K6 904 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 ZBTB46Q86UZ6 589 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 DENND6AQ8IWF6 608 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 OR2T34Q8NGX1 318 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 OR2T3Q8NH03 318 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 BORCS5Q969J3 196 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 DUS3LQ96G46 650 aaKnown RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 ADI1Q9BV57 179 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 NPLQ9BXD5 320 aaPredicted RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 RPF2Q9H7B2 306 aaKnown RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 INIPQ9NRY2 104 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 SARDHQ9UL12 918 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 TLL2Q9Y6L7 1015 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 ZNF701M0R085 212 aaPredicted RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 NPHS1O60500 1241 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 GPC4O75487 556 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 TGFB3P10600 412 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 BMP2P12643 396 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 NME5P56597 212 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 MPP1Q00013 466 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 PMS2P3Q13401 168 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 TGFBIQ15582 683 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 TBCELQ5QJ74 424 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 RWDD4Q6NW29 188 aaKnown RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 PIWIL4Q7Z3Z4 852 aaKnown RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 NT5DC4Q86YG4 428 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 GBA3Q9H227 469 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 MRPL46Q9H2W6 279 aaKnown RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 FAM124BQ9H5Z6 455 aaPredicted RBP14.58□□□□□ -0.08
SNX20-202ENST00000330943 TNFRSF12AQ9NP84 129 aa14.58□□□□□ -0.08
SNX20-202ENST00000330943 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms