RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SYBUQ9NX95 663 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 GTSE1Q9NYZ3 720 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 CNOT6Q9ULM6 557 aaKnown RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 AURKCQ9UQB9 309 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 SORBS2O94875 1100 aaKnown RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 PARNO95453 639 aaKnown RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 CPNE6O95741 557 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 FUCA1P04066 466 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 PAMP19021 973 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 GRIA1P42261 906 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 ATP6V0D1P61421 351 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 SNRNP48Q6IEG0 339 aaKnown RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 OLFML1Q6UWY5 402 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 XKR5Q6UX68 686 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 FAM183BPQ6ZVS7 135 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 SMIM5Q71RC9 77 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 THAP5Q7Z6K1 395 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 MPP5Q8N3R9 675 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 TTLL6Q8N841 843 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 ZSCAN18Q8TBC5 510 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 ANAPC2Q9UJX6 822 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 TCAF1Q9Y4C2 921 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 A0A087X1B8 175 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 C1orf232A0A0U1RR37 186 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 INO80B-WBP1J3KQ70 363 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 M0R3G1 203 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 MAGEB3O15480 346 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 GRIA3P42263 894 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 EEFSECP57772 596 aaKnown RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 POU4F1Q01851 419 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 BFSP2Q13515 415 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 GK3PQ14409 553 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 CYP4V2Q6ZWL3 525 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 FSTL5Q8N475 847 aaPredicted RBP4.83□□□□□ -1.64
PTPN13-201ENST00000316707 STARD8Q92502 1023 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 HPDLQ96IR7 371 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 HGH1Q9BTY7 390 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 AS3MTQ9HBK9 375 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 SETD4Q9NVD3 440 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF358Q9NW07 568 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 EBF1Q9UH73 591 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 CPQQ9Y646 472 aa4.83□□□□□ -1.64
PTPN13-201ENST00000316707 DDX60LQ5H9U9 1706 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 MYOCOSA0A1B0GUC4 107 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TCP10L2B9ZVM9 353 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 AQP9O43315 295 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TOP3BO95985 862 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 LTFP02788 710 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 MBL2P11226 248 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 LRPAP1P30533 357 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GABARAPL2P60520 117 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RPS6KA2Q15349 733 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ATP6AP1Q15904 470 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM198Q66K66 360 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CYP2R1Q6VVX0 501 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RNF149Q8NC42 400 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 DNERQ8NFT8 737 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 USP33Q8TEY7 942 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PSD2Q9BQI7 771 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 OSBPL10Q9BXB5 764 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SMARCAD1Q9H4L7 1026 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PRDM12Q9H4Q4 367 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SLC38A7Q9NVC3 462 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TMEM181Q9P2C4 612 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 IFT80Q9P2H3 777 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 DAPK2Q9UIK4 370 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 MAGED2Q9UNF1 606 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 IGKV6D-21A0A0A0MT36 114 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 STX16-NPEPL1H3BU86 382 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 UBXN8O00124 270 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 HPRP00739 348 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CHRNGP07510 517 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GSTT2P0CG29 244 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GSTT2BP0CG30 244 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GRK3P35626 688 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RAB10P61026 200 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 RAB39AQ14964 217 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CA9Q16790 459 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 DGUOKQ16854 277 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 PCID2Q5JVF3 399 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ZC3HC1Q86WB0 502 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 AGR3Q8TD06 166 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 HDAC2Q92769 488 aaKnown RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 NPAS2Q99743 824 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TJP2Q9UDY2 1190 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 AP3M1Q9Y2T2 418 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ISPDA4D126 451 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SAGE2PA6NJ88 616 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 TULP3O75386 442 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 SULT1C4O75897 302 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF24P17028 368 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CDH15P55291 814 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 GALNT18Q6P9A2 607 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 KCTD8Q6ZWB6 473 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 USP51Q70EK9 711 aa4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CCDC117Q8IWD4 279 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-201ENST00000316707 CLYBLQ8N0X4 340 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms