RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 KDM4CQ9H3R0 1056 aa10.72□□□□□ -0.69
CLP1-201ENST00000302731 RHOJQ9H4E5 214 aa10.72□□□□□ -0.69
CLP1-201ENST00000302731 IARS2Q9NSE4 1012 aaKnown RBP10.72□□□□□ -0.69
CLP1-201ENST00000302731 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
CLP1-201ENST00000302731 SLC17A6Q9P2U8 582 aa10.72□□□□□ -0.69
CLP1-201ENST00000302731 RRP15Q9Y3B9 282 aaKnown RBP10.72□□□□□ -0.69
CLP1-201ENST00000302731 DENND4CQ5VZ89 1909 aa10.72□□□□□ -0.69
CLP1-201ENST00000302731 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CXorf51AA0A1B0GTR3 108 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 MROH6A6NGR9 719 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CCT8L1PA6NM43 557 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 MUSKO15146 869 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
CLP1-201ENST00000302731 TGDSO95455 350 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 RB1P06400 928 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 SPATA31D3P0C874 917 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 EN2P19622 333 aaPredicted RBP10.71□□□□□ -0.69
CLP1-201ENST00000302731 CR2P20023 1033 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 DDX6P26196 483 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLP1-201ENST00000302731 ARNTP27540 789 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 HOXA9P31269 272 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CTNNB1P35222 781 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CHRNA4P43681 627 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CSRP3P50461 194 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 ERVFC1P60507 584 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 IHHQ14623 411 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 ZKSCAN8Q15776 578 aaPredicted RBP10.71□□□□□ -0.69
CLP1-201ENST00000302731 PCSK7Q16549 785 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 INO80DQ53TQ3 878 aaPredicted RBP10.71□□□□□ -0.69
CLP1-201ENST00000302731 RALGPS1Q5JS13 557 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 SIRPB2Q5JXA9 342 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 TSTD2Q5T7W7 516 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 RNF43Q68DV7 783 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CGB2Q6NT52 195 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 ESRP1Q6NXG1 681 aaKnown RBP10.71□□□□□ -0.69
CLP1-201ENST00000302731 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 CCDC121Q6ZUS5 278 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 ZC3HC1Q86WB0 502 aaKnown RBP10.71□□□□□ -0.69
CLP1-201ENST00000302731 DCLK2Q8N568 766 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 SPPL3Q8TCT6 385 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 IFT43Q96FT9 208 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 VPS39Q96JC1 886 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 GPR22Q99680 433 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 SPON2Q9BUD6 331 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 SLC13A1Q9BZW2 595 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 ASAH2Q9NR71 780 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 TLR9Q9NR96 1032 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 IL1RAPL1Q9NZN1 696 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 SIRPGQ9P1W8 387 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 KLHL14Q9P2G3 628 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 PRDM4Q9UKN5 801 aa10.71□□□□□ -0.69
CLP1-201ENST00000302731 MIA3Q5JRA6 1907 aa10.71□□□□□ -0.7
CLP1-201ENST00000302731 ALPK3Q96L96 1907 aa10.71□□□□□ -0.7
CLP1-201ENST00000302731 H0Y626 953 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 INSIG1O15503 277 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 SLC7A4O43246 635 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 TBL1XO60907 577 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 VAPBO95292 243 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 NDST3O95803 873 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 CKMP06732 381 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 CLCN4P51793 760 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 CORO7P57737 925 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 ZXDBP98169 803 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 ACVR1Q04771 509 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 NSUN2Q08J23 767 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLP1-201ENST00000302731 THOC5Q13769 683 aaKnown RBP10.7□□□□□ -0.7
CLP1-201ENST00000302731 CNGA3Q16281 694 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 CCDC153Q494R4 210 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 PPM1LQ5SGD2 360 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 RNF219Q5W0B1 726 aaPredicted RBP10.7□□□□□ -0.7
CLP1-201ENST00000302731 ATG16L1Q676U5 607 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 FAM47EQ6ZV65 393 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 SLC25A41Q8N5S1 370 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 OTUD6BQ8N6M0 293 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 GBP7Q8N8V2 638 aaPredicted RBP10.7□□□□□ -0.7
CLP1-201ENST00000302731 LEMD2Q8NC56 503 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 C2CD4AQ8NCU7 369 aaPredicted RBP10.7□□□□□ -0.7
CLP1-201ENST00000302731 ARMC2Q8NEN0 867 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 POF1BQ8WVV4 589 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 CCT6BQ92526 530 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 PTPRN2Q92932 1015 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 NUDCD1Q96RS6 583 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 TRIB3Q96RU7 358 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 ATXN3LQ9H3M9 355 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 SLCO1B3Q9NPD5 702 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 SNX15Q9NRS6 342 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 DNMT3BQ9UBC3 853 aaKnown RBP10.7□□□□□ -0.7
CLP1-201ENST00000302731 ARHGAP26Q9UNA1 814 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 ANKRD6Q9Y2G4 727 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 SH3BP1Q9Y3L3 701 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 OR51B4Q9Y5P0 310 aa10.7□□□□□ -0.7
CLP1-201ENST00000302731 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
CLP1-201ENST00000302731 LINC01553A4QN01 128 aa10.69□□□□□ -0.7
CLP1-201ENST00000302731 TSPAN3O60637 253 aa10.69□□□□□ -0.7
CLP1-201ENST00000302731 PLIN3O60664 434 aa10.69□□□□□ -0.7
CLP1-201ENST00000302731 ZMPSTE24O75844 475 aa10.69□□□□□ -0.7
CLP1-201ENST00000302731 BPGMP07738 259 aa10.69□□□□□ -0.7
CLP1-201ENST00000302731 ARF5P84085 180 aa10.69□□□□□ -0.7
CLP1-201ENST00000302731 CYP4F8P98187 520 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms