RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 TUBA8Q9NY65 449 aaPredicted RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 GTF3C4Q9UKN8 822 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 LARGE1O95461 756 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ABCA11PQ4W5N1 156 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF484Q5JVG2 852 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 PLCZ1Q86YW0 608 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 MXRA8Q9BRK3 442 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 DCLK3Q9C098 648 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 EXD2Q9NVH0 621 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 TUBP50607 506 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 EIF5AP63241 154 aaKnown RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF548Q8NEK5 533 aaPredicted RBP13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 METTL21AQ8WXB1 218 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 NKIRAS2Q9NYR9 191 aa13.32□□□□□ -0.28
SMARCA5-201ENST00000283131 A0A096LPK6 155 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 CASTOR2A6NHX0 329 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 USP27XA6NNY8 438 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 S100A12P80511 92 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PRCCQ92733 491 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 TRHDEQ9UKU6 1024 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PRLRP16471 622 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PLK1P53350 603 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 RAET1GQ6H3X3 334 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ANKRD26P1Q6NSI1 321 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 KLHL5Q96PQ7 755 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 RPA1P27694 616 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 RPL21P46778 160 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ORC1Q13415 861 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ZFP69Q49AA0 526 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 BEND5Q7L4P6 421 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 EIF1ADQ8N9N8 165 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 BHLHE22Q8NFJ8 381 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 NAT14Q8WUY8 206 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ING5Q8WYH8 240 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SYN2Q92777 582 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 CD101Q93033 1021 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SMPD4Q9NXE4 827 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ISM1B1AKI9 464 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ADRA2BP18089 450 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 CDK7P50613 346 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 AAGABQ6PD74 315 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 APTXQ7Z2E3 356 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 TBL1YQ9BQ87 522 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 TRPV5Q9NQA5 729 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 H0YJX3 145 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PPEF2O14830 753 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 FAM153BP0C7A2 387 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 HOXB8P17481 243 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 CDH3P22223 829 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 MC1RQ01726 317 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SNAP47Q5SQN1 464 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 RNF148Q8N7C7 305 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 GIPC3Q8TF64 312 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 WDR12Q9GZL7 423 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 MED28Q9H204 178 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 GMIPQ9P107 970 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 H0Y858 1186 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 AMHP03971 560 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 RARGP13631 454 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 UBR7Q8N806 425 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PCDH19Q8TAB3 1148 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 POP5Q969H6 163 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 ZNF285Q96NJ3 590 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 HCN3Q9P1Z3 774 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 QSOX1O00391 747 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 TLX3O43711 291 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 CELF2O95319 508 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SAGP10523 405 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SDC2P34741 201 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SNRPD1P62314 119 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 BTG3Q14201 252 aaPredicted RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 LZTR1Q8N653 840 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 THRSPQ92748 146 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 C3orf14Q9HBI5 128 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 EURLQ9NYK6 297 aa13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 SAMHD1Q9Y3Z3 626 aaKnown RBP13.31□□□□□ -0.28
SMARCA5-201ENST00000283131 A0A0G2JPF8 293 aa13.3□□□□□ -0.28
SMARCA5-201ENST00000283131 HNRNPCL3B7ZW38 293 aa13.3□□□□□ -0.28
SMARCA5-201ENST00000283131 DCXO43602 365 aa13.3□□□□□ -0.28
SMARCA5-201ENST00000283131 REM1O75628 298 aa13.3□□□□□ -0.28
SMARCA5-201ENST00000283131 MATN4O95460 622 aa13.3□□□□□ -0.28
SMARCA5-201ENST00000283131 HNRNPCL4P0DMR1 293 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms