RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Tra2aQ6PFR5 281 aaKnown RBP30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Nudcd1Q6PIP5 582 aa30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Zswim6Q80TB7 1207 aa30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Defb22Q8BVC1 179 aa30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Fam149aQ8CFV2 787 aa30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 PlvapQ91VC4 438 aa30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Coro1bQ9WUM3 484 aaKnown RBP30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Plce1Q8K4S1 2282 aa30.83■■■□□ 2.53
Ctdnep1-201ENSMUST00000108593 Gm2897K7N6T7 172 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cry1P97784 606 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Elavl3Q60900 367 aaKnown RBP30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Sox11Q7M6Y2 395 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Zbtb41Q811F1 908 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Pi15Q8BS03 258 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Pdcl3Q8BVF2 240 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Eva1bQ8K2Y3 164 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Lrrc42Q8R2U7 421 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Olfr665Q8VG79 316 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Rexo2Q9D8S4 237 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Prpf4Q9DAW6 521 aaKnown RBP30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Clcn5Q9WVD4 746 aa30.82■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Gm7792A0A0J9YU01 481 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 RlfA2A7F4 1918 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Gm3183D3YUJ6 481 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ddx43D3Z6P9 646 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Gm3139J3QK78 481 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Gm3106J3QPH3 481 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Xbp1O35426 267 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 AvilO88398 819 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Kctd19Q562E2 927 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Mtus1Q5HZI1 1210 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Nt5eQ61503 576 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Tpgs2Q66JT5 296 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 OcrlQ6NVF0 900 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Fam185aQ7TPD2 378 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Hamp2Q80T19 83 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ddrgk1Q80WW9 315 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Fam72aQ8BFZ8 149 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Spata2Q8K004 515 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 NoboxQ8VIH1 527 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Col25a1Q99MQ5 666 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 CoprsQ9CQ13 173 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Rnf146Q9CZW6 359 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Thap11Q9JJD0 305 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Rps6kb2Q9Z1M4 485 aa30.81■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Zfp780bE9Q2S6 806 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Nsmce4aG3XA30 381 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Psen1P49769 467 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Mc1rQ01727 315 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ndufaf2Q59J78 168 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Mettl21cQ8BLU2 248 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Sfr1Q8BP27 319 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Sh2d5Q8JZW5 429 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Slc36a1Q8K4D3 475 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 XpotQ9CRT8 963 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Senp8Q9D2Z4 221 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Tlr9Q9EQU3 1032 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 PlekQ9JHK5 350 aaKnown RBP30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Elovl2Q9JLJ4 292 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cylc2B1AWN8 422 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cd151O35566 253 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Stx7O70439 261 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 PnpP23492 289 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Polr3bP59470 1133 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ap1s1P61967 158 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Hdhd2Q3UGR5 259 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Sdf4Q61112 361 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Insig1Q8BGI3 259 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Dupd1Q8BK84 215 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cdh7Q8BM92 785 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Otud6bQ8K2H2 294 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Imp4Q8VHZ7 291 aaKnown RBP30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Mapk8Q91Y86 384 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Camk1Q91YS8 374 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Fam76aQ922G2 307 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Tex46Q9CPU3 165 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Hyal6Q9D4E9 494 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cyb561d2Q9WUE3 222 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Gria3Q9Z2W9 888 aa30.8■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 A0A1L1STL9 112 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Pcdh9F8VPK8 1237 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Cd19P25918 547 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 InscQ3HNM7 579 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Spout1Q3UHX9 385 aaKnown RBP30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 CcncQ62447 283 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ablim3Q69ZX8 682 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ublcp1Q8BGR9 318 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Mterf2Q8BKY8 385 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 AmotQ8VHG2 1126 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Dr1Q91WV0 176 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Bcl7aQ9CXE2 210 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Asb4Q9WV71 426 aa30.79■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Pabpc4lG5E8X2 370 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Grk4O70291 574 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Becn2P0DM65 447 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 CryaaP24622 196 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Rpl22P67984 128 aaKnown RBP30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Ccdc157Q5SPX1 718 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Parp6Q6P6P7 630 aa30.78■■■□□ 2.52
Ctdnep1-201ENSMUST00000108593 Slc8a2Q8K596 921 aa30.78■■■□□ 2.52
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms