RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Pold3Q9EQ28 462 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Msl3Q9WVG9 525 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm36028A0A0U1RPM1 299 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Olfr1049A2ARZ0 308 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm3259D3YUK0 475 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cyp2b19O55071 492 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 P01668 110 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 PdgfrbP05622 1098 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pgk2P09041 417 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ckmt1P30275 418 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Elk4P41158 430 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pld2P97813 933 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Lsg1Q3UM18 644 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mief2Q5NCS9 454 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rabl6Q5U3K5 725 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zfp512bQ6PHP4 879 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tas2r129Q7M709 320 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Akap7Q7TN79 314 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 DseQ8BLI4 958 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Parp9Q8CAS9 866 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Taco1Q8K0Z7 294 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dlk2Q8K1E3 382 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nol6Q8R5K4 1152 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Snx9Q91VH2 595 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sh3d19Q91X43 789 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Golm1Q91XA2 393 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cybrd1Q925G2 290 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rab27aQ9ERI2 221 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cacng4Q9JJV4 327 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Morf4l2Q9R0Q4 288 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rps6ka2Q9WUT3 733 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rhox3fA2ANE1 215 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tmem245B1AZA5 876 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Olfr596F8VQ26 312 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 NmbrO54799 390 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Psmd3P14685 530 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Casp2P29594 452 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ptpn1P35821 432 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hoxb13P70321 286 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ncf4P97369 339 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Axdnd1Q3UZ57 424 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Syce1lQ5D525 247 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm5431Q5NCB3 844 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mef2dQ63943 514 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 MroQ7TNB4 248 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ints7Q7TQK1 966 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sec24bQ80ZX0 1251 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Samd4aQ8CBY1 711 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Creb5Q8K1L0 357 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Il31raQ8K5B1 716 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sgpl1Q8R0X7 568 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slc30a5Q8R4H9 761 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tmco1Q921L3 188 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 DarsQ922B2 501 aaKnown RBP13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cdc26Q99JP4 85 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dok4Q99KE3 325 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 MydgfQ9CPT4 166 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pgm3Q9CYR6 542 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mrpl17Q9D8P4 176 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ampd2Q9DBT5 798 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hmgn3Q9DCB1 99 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slamf1Q9QUM4 343 aa13.04□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tmem131O70472 1877 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zscan4bE9Q3G0 505 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn1r76F8VQ63 324 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slc9a3G3X939 829 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rhox2gL7MUB9 191 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 P01673 111 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 PtprcP06800 1291 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hrh2P97292 397 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mc1rQ01727 315 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Wdr36Q3TAQ9 899 aaKnown RBP13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pag1Q3U1F9 429 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Foxred2Q3USW5 665 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 GpamQ61586 827 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Has1Q61647 583 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rslcan18Q7M6X5 460 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Olfr698Q7TRN4 311 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fndc11Q80WB0 326 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 SvopQ8BFT9 548 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 OsgepQ8BWU5 335 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 TwnkQ8CIW5 685 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Acsm2Q8K0L3 575 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Stx5Q8K1E0 355 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tbc1d22aQ8R5A6 516 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zfp65Q91W94 390 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Serpina3nQ91WP6 418 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ak5Q920P5 562 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Them5Q9CQJ0 248 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 DtnaQ9D2N4 746 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Q9D4A5 307 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Trpc4Q9QUQ5 974 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ptk2bQ9QVP9 1009 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Egfl7Q9QXT5 275 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tbk1Q9WUN2 729 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Trpc7Q9WVC5 862 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Adam17Q9Z0F8 827 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zscan12Q9Z1D7 501 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Phf11A6H5X4 337 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slc16a6B1AT66 607 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms