RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 BrafP28028 804 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Gdf5P43027 495 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 ClgnP52194 611 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ctdsp1P58466 261 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Adamts15P59384 950 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 CamkmtQ3U2J5 323 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ankrd13cQ3UX43 541 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Eri2Q5BKS4 688 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 AsnsQ61024 561 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 BC061237Q6P8I2 184 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Raver2Q7TPD6 673 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Tspan18Q80WR1 248 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ptpn7Q8BUM3 359 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Lacc1Q8BZT9 430 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Dus1lQ8C2P3 475 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Vps52Q8C754 723 aaKnown RBP7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Nudt6Q8CH40 313 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Vmn1r8Q8R2C2 303 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Olfr525Q8VGL5 309 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Cd209cQ91ZW9 178 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Chrm5Q920H4 532 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Mrfap1Q9CQL7 125 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Ift43Q9DA69 206 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Nkx2-4Q9EQM3 354 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Prss16Q9QXE5 509 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Sik3Q6P4S6 1311 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Npc1l1Q6T3U4 1333 aa7.4□□□□□ -1.22
Ccdc54-201ENSMUST00000062439 Tanc1Q0VGY8 1856 aa7.4□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zdbf2Q5SS00 2493 aaKnown RBP7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Dicer1Q8R418 1916 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Col20a1Q923P0 1320 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zbed6D2EAC2 980 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gm5286E0CXI6 357 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ccdc188F6WEU2 249 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sstr5O08858 362 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 RhoP15409 348 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Il2rbP16297 539 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zp2P20239 713 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Aimp1P31230 310 aaKnown RBP7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Psmc2P46471 433 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Lbx1P52955 282 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tgif1P70284 272 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Emc10Q3TAS6 258 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cfap52Q5F201 620 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Bdkrb1Q61125 334 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rad54bQ6PFE3 886 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Znf503Q7TMA2 652 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 PrcpQ7TMR0 491 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sdccag8Q80UF4 717 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Snx32Q80ZJ7 404 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Q8BGC1 442 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zfp449Q8CB76 518 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zfp119bQ8K0G9 543 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Olfr659Q8VGV6 322 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Lpin1Q91ZP3 924 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Xrcc4Q924T3 326 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rassf1Q99MK9 340 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sec23bQ9D662 767 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 1700080O16RikQ9D9G4 284 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Hils1Q9QYL0 170 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Celf2Q9Z0H4 508 aaKnown RBP7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Fkbp9Q9Z247 570 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Fem1bQ9Z2G0 627 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 UtrnE9Q6R7 3430 aa7.39□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Lamb1P02469 1786 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Aox4Q3TYQ9 1336 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tbc1d4Q8BYJ6 1307 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zfp534A2A7A1 661 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tcp11x2A2AEI7 503 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Olfr1335B2RVY8 335 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Zfp989H3BLB0 661 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ascl4M0QW46 144 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ninj1O70131 152 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tcstv3O70518 169 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Rps6ka3P18654 740 aaKnown RBP7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 GastP48757 101 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Fermt1P59113 677 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gal3st3P61315 431 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Vmn1r236Q05A06 334 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Mfsd12Q3U481 476 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Gxylt1Q3UHH8 404 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 PfplQ5RKV8 702 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Cntn2Q61330 1040 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Sqstm1Q64337 442 aaKnown RBP7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Bhlhb9Q6PB60 539 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tmem202Q80W35 275 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Znf8Q8BGV5 572 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Slc44a2Q8BY89 706 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Epc2Q8C0I4 808 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Bbs4Q8C1Z7 520 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 4931406P16RikQ8C5X1 1059 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 NaprtQ8CC86 538 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Tctex1d4Q8CDY7 219 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Kctd2Q8CEZ0 266 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 MyripQ8K3I4 856 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Ces1Q8VCC2 565 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Thap7Q8VCZ3 309 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Uba5Q8VE47 403 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 DgkgQ91WG7 788 aa7.38□□□□□ -1.23
Ccdc54-201ENSMUST00000062439 Pycr2Q922Q4 320 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms