RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Alg2Q9DBE8 415 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ethe1Q9DCM0 254 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Kcne4Q9WTW3 170 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 4933424G06RikA0A140LIP3 267 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ahcyl2Q68FL4 613 aaKnown RBP9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Unc5bQ8K1S3 945 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Stx19Q8R1Q0 292 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Wipi1Q8R3E3 446 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nrbp2Q91V36 499 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pbld2Q9CXN7 288 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tmem39aQ9CYC3 486 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Sgf29Q9DA08 293 aaKnown RBP9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Spag4Q9JJF2 443 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ube2l6Q9QZU9 153 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cdc7Q9Z0H0 564 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Dsc3P55850 896 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Snap25P60879 206 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Wee2Q66JT0 555 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ppp1r3cQ7TMB3 317 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Timmdc1Q8BUY5 285 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 H6pdQ8CFX1 789 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vmn1r53Q9EP93 310 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Acot9Q9R0X4 439 aaKnown RBP9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Wif1Q9WUA1 379 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Znf394Q9Z1D9 521 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gucy1a2F8VQK3 730 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cd4P06332 457 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ccnd1P25322 295 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gjb3P28231 270 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nr2c2P49117 596 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Kcnh8P59111 1102 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 AccslQ3UX83 580 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cyb5d2Q5SSH8 263 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ddr2Q62371 854 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Apex2Q68G58 516 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Fam126aQ6P9N1 521 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pip5kl1Q6U7H8 395 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cfap97Q6ZPR1 541 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc22a27Q76M72 551 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CptpQ8BS40 216 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Apol9bQ8C7I4 310 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rps6kl1Q8R2S1 544 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Apol9aQ8VDU3 310 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nrif2Q921B4 824 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cela3bQ9CQ52 269 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Zfp68Q9Z116 606 aa9.04□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm5934D3Z4U6 212 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 F6Y6L6 278 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm28051J3QMA2 81 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Eef1a1P10126 462 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nectin2P32507 530 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Igfbp1P47876 272 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Eef1a2P62631 463 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pid1Q3UBG2 217 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Hspb6Q5EBG6 162 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Sntb2Q61235 520 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 ArhgdigQ62160 225 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 TrhQ62361 256 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Adam26bQ6IMH6 699 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Arhgef33Q8BW86 850 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vps37cQ8R105 352 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Scgb1b27Q91WB5 92 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pcdhb22Q91XZ8 794 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CsprsQ99388 208 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Med30Q9CQI9 178 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Agpat3Q9D517 376 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Bola1Q9D8S9 137 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ebna1bp2Q9D903 306 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Col13a1Q9R1N9 751 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Fyco1Q8VDC1 1437 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Dpy19l1A6X919 746 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Zbed5B2RPU8 756 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm10250G3X9L6 160 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Anxa8O35640 327 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cyp2b19O55071 492 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CblP22682 913 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rab19P35294 217 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CtdsplP58465 276 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Spata18Q0P557 537 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 DgkqQ6P5E8 934 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Npr2Q6VVW5 1047 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rab44Q8CB87 725 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 IntS13Q8QZV7 732 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Serpinb9gQ8VHQ1 377 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tubb6Q922F4 447 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 RtcbQ99LF4 505 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Lipt2Q9D009 231 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mrpl21Q9D1N9 209 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ccdc3Q9D6Y1 273 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 AcoxlQ9DBS4 632 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nr4a3Q9QZB6 627 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slfn2Q9Z0I6 378 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Trav5-4A0A075B652 114 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm5072A2AHM1 344 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm7951E9Q0A2 213 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm17124F6ZIG1 213 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mettl7a3G3X9G9 244 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 A1bgQ19LI2 512 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Colec11Q3SXB8 272 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gcnt3Q5JCT0 437 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms