RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fbxw11Q5SRY7 542 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ggnbp1Q6K1E7 370 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 4933402J07RikQ8BHX0 270 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Samd4aQ8CBY1 711 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fubp1Q91WJ8 651 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Bcas2Q9D287 225 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cdyl2Q9D5D8 503 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Stx12Q9ER00 274 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gprc5dQ9JIL6 344 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cdkl2Q9QUK0 568 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dbn1Q9QXS6 706 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Psmd13Q9WVJ2 376 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rpl9-ps1S4R1R7 191 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Usp51B1AY15 661 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 FgaE9PV24 789 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Adamts14E9PX39 1209 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CrymO54983 313 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Dmp1O55188 503 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 YwhaqP68254 245 aaKnown RBP9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pou2f2Q00196 463 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cog7Q3UM29 770 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ubtfl1Q3USZ2 394 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zbtb8osQ505B7 168 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gstt1Q64471 240 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 RetsatQ64FW2 609 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr1415Q7TQS4 311 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tmem154Q8C4Q9 181 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Snx8Q8CFD4 459 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Olfr1416Q8VGU4 312 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pip4k2cQ91XU3 421 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Atpaf2Q91YY4 289 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Upk1aQ9D132 257 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slamf1Q9QUM4 343 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CasrQ9QY96 1079 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zbtb12Q9Z150 459 aa9.9□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Scn10aQ6QIY3 1958 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm36028A0A0U1RPM1 299 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ttll8A4Q9F1 832 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Skint6A7XUZ6 1240 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 D830030K20RikE9PYQ5 218 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3043K7N693 218 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm16440K7N6G6 218 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rhox2gL7MUB9 191 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm2244L7N2A3 218 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm3278L7N2D2 218 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm8271L7N2E2 218 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 ZfaP23607 742 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fitm2P59266 262 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mc1rQ01727 315 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Armcx5Q3UZB0 606 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Brsk2Q69Z98 735 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc7a4Q8BLQ7 635 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 TbcelQ8C5W3 424 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zmiz2Q8CIE2 920 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ssh3Q8K330 649 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pcolce2Q8R4W6 414 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 MrgpreQ91ZB7 310 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Mgrn1Q9D074 532 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 PolkQ9QUG2 852 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Aqp5Q9WTY4 265 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 S1pr4Q9Z0L1 386 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm6509A0A0J9YUV1 481 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pex10B1AUE5 324 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm8113E0CXS8 587 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cntnap3E9PY62 1287 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm6351K9J7D1 481 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 ZfrO88532 1074 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 CfhP06909 1234 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 PenkP22005 268 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tlx1P43345 332 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sult1e1P49891 295 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gpc4P51655 557 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lsg1Q3UM18 644 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rbm44Q3V089 1013 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cfap52Q5F201 620 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ssxb3Q6XAS4 170 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 DdnQ80TS7 710 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tspan18Q80WR1 248 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Q80Y73 168 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ticam2Q8BJQ4 232 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Tgm6Q8BM11 706 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Rmdn2Q8BSE0 410 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slc44a2Q8BY89 706 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ston2Q8BZ60 895 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Pcdhga10Q91XY9 930 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 B4galt3Q91YY2 395 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 PigxQ99LV7 254 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Zfp655Q9CZP3 541 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Il20Q9JKV9 176 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cldn3Q9Z0G9 219 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Kcnq2Q9Z351 759 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ttc3O88196 1979 aaKnown RBP9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Fam81bA0A140LI28 432 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Slfn9B1ARD6 910 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Cyp2w1E9Q816 493 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Gm8257E9Q8R3 264 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ap1g1P22892 822 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Sipa1P46062 1037 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Ctps2P70303 586 aa9.89□□□□□ -0.83
Ccdc40-202ENSMUST00000053440 Lrrc8bQ5DU41 803 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms