RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Krt5Q922U2 580 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dok4Q99KE3 325 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 MmadhcQ99LS1 296 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Q9CQC3 228 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 ArpinQ9D0A3 226 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Calr3Q9D9Q6 380 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zswim2Q9D9X6 631 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rhobtb1Q9DAK3 695 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 FignQ9ERZ6 759 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rpf2Q9JJ80 306 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrrc37aB1AWG4 3215 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Adam34A2RSG8 714 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Taf4E9QAP7 1042 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm2888K7N746 267 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ltb4rO88855 351 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 LifP09056 203 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PhbP67778 272 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AcdQ5EE38 416 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slc5a10Q5SWY8 596 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mettl20Q80ZM3 255 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Creb3l2Q8BH52 521 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bpifb6Q8BU51 449 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 RabepkQ8VCH5 380 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rpp25Q91WE3 199 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 BniplQ99JU7 328 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cttnbp2nlQ99LJ0 638 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slc40a1Q9JHI9 570 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ccdc86Q9JJ89 426 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tmed2Q9R0Q3 201 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mtm1Q9Z2C5 603 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 KcpQ3U492 1550 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lamb2Q61292 1799 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm45861A0A1B0GRY3 1923 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Plxnb3Q9QY40 1902 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Igkv5-45A0A0B4J1J1 115 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Olfr742A2RTP5 311 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gsg1l2M0QWL6 290 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lmnb2P21619 596 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Glb1P23780 647 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slc1a1P51906 523 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kcnn2P58390 839 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bpifa1P97361 278 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zswim9Q6DI92 447 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Foxo6Q70KY4 559 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slc41a1Q8BJA2 512 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pitrm1Q8K411 1036 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gtse1Q8R080 741 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kiaa2013Q91X21 634 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fkbp6Q91XW8 327 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trim7Q923T7 510 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kdelr1Q99JH8 212 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf135Q9CWS1 417 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mrps22Q9CXW2 359 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 HaghlQ9DB32 283 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Scgb2b20Q9JI02 112 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bace2Q9JL18 514 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Entpd5Q9WUZ9 427 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 CenpfE9Q3P4 2997 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 BC051665E9Q623 330 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm3159K7N760 267 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Birc5O70201 140 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Sp1O89090 784 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Nckap1P28660 1128 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pitx1P70314 315 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bmp1P98063 991 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gtpbp2Q3UJK4 602 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Abl2Q4JIM5 1182 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ifnl2Q4VK74 193 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trim38Q5SZ99 471 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PolnQ7TQ07 864 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gramd1bQ80TI0 738 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ppm1lQ8BHN0 360 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Wdr26Q8C6G8 641 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tram1l1Q8QZR0 363 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 TarsQ9D0R2 722 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PudpQ9D5U5 234 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slco6d1Q9D5W6 683 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Akain1G3UWD5 69 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 H2-Q8P14430 326 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Defa-rs2P17534 91 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 InhbcP55104 352 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gmeb2P58929 530 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rab6bP61294 208 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Neurog1P70660 244 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Taar7aQ5QD12 358 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Shroom1Q5SX79 823 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Atp2a3Q64518 1038 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Znf728Q6P5C7 752 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrrn2Q6PHP6 730 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 FukQ7TMC8 1090 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrrc1Q80VQ1 524 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pcdha1Q91Y21 948 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bzw1Q9CQC6 419 aaKnown RBP6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam212aQ9CX62 282 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Arl2bpQ9D385 163 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tspan17Q9D7W4 270 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Grk1Q9WVL4 564 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AtmQ62388 3066 aa6.98□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Plxna1P70206 1894 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 5730507C01RikJ3QPX0 416 aa6.97□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms