RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 StacP97306 403 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Klrb1Q0ZUP1 214 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Defb25Q30KN8 71 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Q3V0E1 1183 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Ccdc110Q3V125 848 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 RhocQ62159 193 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Adat2Q6P6J0 191 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Dalrd3Q6PJN8 538 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Efr3bQ6ZQ18 817 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Olfr26Q7TRB7 308 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Bcas1Q80YN3 633 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Abhd8Q8R0P8 439 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Olfr933Q9EQA0 308 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Vmn2r59E9PUT5 865 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Ifnar2O35664 513 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Per3O70361 1113 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Sbk3P0C5K0 361 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Wnt8aQ64527 354 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Otop2Q80SX5 563 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Ccdc50Q810U5 305 aaKnown RBP23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Fstl5Q8BFR2 847 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Znf879Q8BI99 563 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Samd7Q8C8Y5 445 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Cyp2c55Q9D816 490 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Cacng3Q9JJV5 315 aa23.17■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Arhgef37A1IGU4 676 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Maml3D4QGC2 1135 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 P01810 119 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 PdgfrbP05622 1098 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 JundP15066 341 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Gpr65Q61038 337 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Cdc14bQ6PFY9 485 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Ccnt2Q7TQK0 723 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Ano4Q8C5H1 955 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Mtrf1Q8K126 446 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Spag16Q8K450 639 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Mrps22Q9CXW2 359 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Tmed2Q9R0Q3 201 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 HephQ9Z0Z4 1157 aa23.16■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Olfr1049A2ARZ0 308 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Limk2O54785 638 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Pde8aO88502 823 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Akr1b7P21300 316 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Ncf4P97369 339 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Cdk16Q04735 496 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 TdrkhQ80VL1 560 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Fzd10Q8BKG4 582 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Nsmce1Q9D720 266 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Myo10F8VQB6 2062 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Gm29133A0A1B0GT72 266 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Cilp2D3Z7H8 1162 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 GzmgP13366 248 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Smpdl3bP58242 456 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Rab33aP97950 237 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 ItkQ03526 625 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Bfsp2Q6NVD9 416 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Arhgef18Q6P9R4 1021 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Galnt10Q6P9S7 603 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 SrlQ7TQ48 910 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Oas1dQ8VI95 361 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Lpgat1Q91YX5 370 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Retreg3Q9CQV4 466 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Gpihbp1Q9D1N2 228 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Clcn2Q9R0A1 908 aa23.15■■□□□ 1.3
Upf3a-201ENSMUST00000043767 Scgb2b21A0A087WQA9 112 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Tcp10cE9Q046 482 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Vmn2r70K7N702 854 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 CidebO70303 219 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 GnazO70443 355 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Pias1O88907 651 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Olfm1O88998 485 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 MipP51180 263 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Sh3gl3Q62421 347 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rad54bQ6PFE3 886 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Stk38lQ7TSE6 464 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Wasf2Q8BH43 497 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Cpsf7Q8BTV2 471 aaKnown RBP23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Olfr589Q8VGV8 317 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 1700013H16RikQ9DAC5 291 aa23.14■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Fpr-rs3O88537 343 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rfx2P48379 717 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ddx6P54823 483 aaKnown RBP23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Lrrn4P59383 733 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Eml1Q05BC3 814 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Luc7l3Q5SUF2 432 aaKnown RBP23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Naif1Q6PFD7 327 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Dnajc15Q78YY6 149 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gtf3c4Q8BMQ2 817 aaKnown RBP23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Slc18a2Q8BRU6 517 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Scara3Q8C850 606 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mtnr1bQ8CIQ6 364 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 OlahQ8R197 265 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Cadm1Q8R5M8 456 aaKnown RBP23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ndufa10Q99LC3 355 aaKnown RBP23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rsc1a1Q9ER99 582 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Capn15Q9JLG8 1095 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Igkv5-39A0A0G2JDV4 115 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rtn2O70622 471 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 PfklP12382 780 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Trim80Q3V061 624 aa23.13■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms