RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Anxa13Q99JG3 317 aa15.21■□□□□ 0.03
Nkx3-1-201ENSMUST00000022646 Sdcbp2Q99JZ0 292 aa15.21■□□□□ 0.03
Nkx3-1-201ENSMUST00000022646 Med21Q9CQ39 144 aa15.21■□□□□ 0.03
Nkx3-1-201ENSMUST00000022646 Fip1l1Q9D824 581 aaKnown RBP15.21■□□□□ 0.03
Nkx3-1-201ENSMUST00000022646 Ifrd2Q9D8U0 441 aa15.21■□□□□ 0.03
Nkx3-1-201ENSMUST00000022646 Eno3P21550 434 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ccnd1P25322 295 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 TubP50586 505 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ctps2P70303 586 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 PtprrQ62132 656 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tatdn1Q6P8M1 295 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rasa4Q6PFQ7 802 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Olfr1062Q7TR71 315 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Pwp2Q8BU03 919 aaKnown RBP15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ssx2ipQ8VC66 615 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ube4bQ9ES00 1173 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Med20Q9R0X0 212 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Fiz1Q9WTJ4 500 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Msl3Q9WVG9 525 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ddx39bQ9Z1N5 428 aaKnown RBP15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cntnap3E9PY62 1287 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm20503G3UZK1 150 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Sema3aO08665 772 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rpl36P47964 105 aaKnown RBP15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Zfp217Q3U0X6 1041 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Glp2rQ5IXF8 512 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Krt32Q62168 407 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Scube1Q6NZL8 1018 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Serpina12Q7TMF5 413 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Atp2c1Q80XR2 918 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Abraxas1Q8BPZ8 407 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Serpina3bQ8BYY9 420 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Trim35Q8C006 501 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tmem154Q8C4Q9 181 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Prpf19Q99KP6 504 aaKnown RBP15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cdkn2aipnlQ9D211 116 aaKnown RBP15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Paip2Q9D6V8 124 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ddx59Q9DBN9 619 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Igkv10-96A0A140T8M1 115 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Vmn2r74E9PW21 853 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Vmn1r76F8VQ63 324 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Slc11a2P49282 568 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 GaaP70699 953 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ddx4Q61496 702 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Crtc1Q68ED7 630 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Klhl14Q69ZK5 630 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Nup54Q8BTS4 510 aaKnown RBP15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Def8Q99J78 448 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rin2Q9D684 903 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Eef1akmt2Q9D853 244 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rnft1Q9DCN7 395 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cdkl2Q9QUK0 568 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Copg1Q9QZE5 874 aa15.2■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Sbf1Q6ZPE2 1867 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm14401A2ARV7 303 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Zbed5B2RPU8 756 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm28043E0CXC2 719 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Spata31E9QAF0 1014 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Neu1O35657 409 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 P01673 111 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Il6raP22272 460 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tial1P70318 392 aaKnown RBP15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Sec31bQ3TZ89 1158 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Kcna4Q61423 654 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 N4bp1Q6A037 893 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rtl3Q6P1Y1 553 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rps27lQ6ZWY3 84 aaKnown RBP15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tecpr1Q80VP0 1166 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Pramel7Q810Y8 479 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Zcchc4Q8BKW4 512 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Poc5Q9DBS8 558 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 NbnQ9R207 751 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Celf2Q9Z0H4 508 aaKnown RBP15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 PtprfA2A8L5 1898 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rnf19bA2A7Q9 732 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm8369E9PZI3 166 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Adcy6Q01341 1165 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Brms1lQ3U1T3 323 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Znf219Q6IQX8 726 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Olfr698Q7TRN4 311 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ahcyl1Q80SW1 530 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Alkbh8Q80Y20 664 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Mterf2Q8BKY8 385 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Eif2b5Q8CHW4 717 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Snapc1Q8K0S9 389 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gsg1Q8R1W2 324 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Mat2bQ99LB6 334 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Wars2Q9CYK1 360 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 TcimQ9D915 106 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Maged2Q9ER67 616 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Chrnb2Q9ERK7 501 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Oxct2bQ9ESL0 520 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Oxct2aQ9JJN4 520 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tagln3Q9R1Q8 199 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Casp8ap2Q9WUF3 1962 aa15.19■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Fpr-rs4A4FUQ5 323 aa15.18■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Skint6A7XUZ6 1240 aa15.18■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Kctd18E0CZ26 429 aa15.18■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm8257E9Q8R3 264 aa15.18■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 MttpO08601 894 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms