RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TTC3P53804 2025 aa19.4■□□□□ 0.7
PRKCSH-209ENST00000589838 MIA3Q5JRA6 1907 aa19.4■□□□□ 0.7
PRKCSH-209ENST00000589838 A0A087X1B8 175 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 FAM95CA0A1B0GW59 222 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 FAM92AA1XBS5 289 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SLCO1B7G3V0H7 640 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SNUPNO95149 360 aaKnown RBP19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SLC35E2BP0CK96 405 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 GABRB3P28472 473 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 GRK4P32298 578 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 COPAP53621 1224 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SLC12A2P55011 1212 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SMARCB1Q12824 385 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SEPT6Q14141 434 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 MRPL58Q14197 206 aaKnown RBP19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 MBTPS1Q14703 1052 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 NAPRTQ6XQN6 538 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 ABI1Q8IZP0 508 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 ACVR1CQ8NER5 493 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 STYXQ8WUJ0 223 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 DRC3Q9H069 523 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 COG4Q9H9E3 785 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 SP110Q9HB58 689 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 BATF3Q9NR55 127 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 CPSF2Q9P2I0 782 aaKnown RBP19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 DNAJB4Q9UDY4 337 aa19.39■□□□□ 0.7
PRKCSH-209ENST00000589838 IGLV3-10A0A075B6K4 115 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 PHGDHO43175 533 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 LUC7L3O95232 432 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 F7P08709 466 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 NCF2P19878 526 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 PTDSS1P48651 473 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 GPR15P49685 360 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 SERPINH1P50454 418 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 POU4F1Q01851 419 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 ILF2Q12905 390 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 CTBP1Q13363 440 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 CNGA3Q16281 694 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 CMPK2Q5EBM0 449 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 NEPROQ6NW34 567 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 FAM43BQ6ZT52 329 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 ZNF781Q8N8C0 355 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 STON2Q8WXE9 905 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 THTPAQ9BU02 230 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 NT5MQ9NPB1 228 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 SRRDQ9UH36 339 aa19.39■□□□□ 0.69
PRKCSH-209ENST00000589838 PAPSS2O95340 614 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 PEX11BO96011 259 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 SLC34A1Q06495 639 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 TNK2Q07912 1038 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 ITKQ08881 620 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 PRKAA1Q13131 559 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 RCN1Q15293 331 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 FAM171A1Q5VUB5 890 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 LRRC8EQ6NSJ5 796 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 ATG14Q6ZNE5 492 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 DENND6AQ8IWF6 608 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 ULK2Q8IYT8 1036 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 SLC43A3Q8NBI5 491 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 SPPL2BQ8TCT7 592 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 KCTD4Q8WVF5 259 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 HMCESQ96FZ2 354 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 ATP13A1Q9HD20 1204 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.38■□□□□ 0.692e-8■□□□□ 9.8
PRKCSH-209ENST00000589838 STX18Q9P2W9 335 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 VTI1BQ9UEU0 232 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 FBXO5Q9UKT4 447 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 MYLKQ15746 1914 aa19.38■□□□□ 0.69
PRKCSH-209ENST00000589838 ARNTP27540 789 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 VHLP40337 213 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 SLC1A2P43004 574 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 RPL14P50914 215 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 KPNA1P52294 538 aaPredicted RBP19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 CLNS1AP54105 237 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 USP46P62068 366 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 MPP1Q00013 466 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 USP4Q13107 963 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 PCSK7Q16549 785 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 ZNF470Q6ECI4 717 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 TFAP2DQ7Z6R9 452 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 TEX26Q8N6G2 289 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 PDCD6IPQ8WUM4 868 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 WDR60Q8WVS4 1066 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 ELMO2Q96JJ3 720 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 SPATA17Q96L03 361 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 ZNF570Q96NI8 536 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 MARCH2Q9P0N8 246 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 PCDHB7Q9Y5E2 793 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 DRGXA6NNA5 263 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 ALDH2P05091 517 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 AVPR1AP37288 418 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 GRIA4P48058 902 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 IL10RBQ08334 325 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 PSMD5Q16401 504 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 TSTD2Q5T7W7 516 aa19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 FSTL5Q8N475 847 aaPredicted RBP19.37■□□□□ 0.69
PRKCSH-209ENST00000589838 TMEM151AQ8N4L1 468 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms