RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SLC12A2P55011 1212 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 MAP3K7CLP57077 242 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 GALNT1Q10472 559 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-206ENST00000587730 LAMB3Q13751 1172 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 PTK2BQ14289 1009 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 SQLEQ14534 574 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 PM20D1Q6GTS8 502 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 BEND5Q7L4P6 421 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 SATL1Q86VE3 508 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 KDM1BQ8NB78 822 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 AGR3Q8TD06 166 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 NDRG1Q92597 394 aaKnown RBP18.81■□□□□ 0.6
DDX39A-206ENST00000587730 HIC2Q96JB3 615 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 CATSPER2Q96P56 530 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 EFHD1Q9BUP0 239 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 ABHD16BQ9H3Z7 469 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 ENTPD7Q9NQZ7 604 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 CLIC5Q9NZA1 410 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 ATXN10Q9UBB4 475 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 XPR1Q9UBH6 696 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 OR12D3Q9UGF7 316 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 LZTS1Q9Y250 596 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 COPG1Q9Y678 874 aaKnown RBP18.81■□□□□ 0.6
DDX39A-206ENST00000587730 TSC2P49815 1807 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 ZNF236Q9UL36 1845 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 PDCD11Q14690 1871 aaKnown RBP18.81■□□□□ 0.6
DDX39A-206ENST00000587730 DLX3O60479 287 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 C8BP07358 591 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 NR1H2P55055 460 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 IRF5Q13568 498 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 PPM1LQ5SGD2 360 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 CHSY3Q70JA7 882 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 LRRC49Q8IUZ0 686 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 CENPLQ8N0S6 344 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-206ENST00000587730 LSMEM2Q8N112 164 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 KCTD4Q8WVF5 259 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 TSPAN17Q96FV3 270 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 DUS3LQ96G46 650 aaKnown RBP18.81■□□□□ 0.6
DDX39A-206ENST00000587730 UNC93B1Q9H1C4 597 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 GJD2Q9UKL4 321 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 SARDHQ9UL12 918 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 SLC45A1Q9Y2W3 748 aa18.81■□□□□ 0.6
DDX39A-206ENST00000587730 FAM95CA0A1B0GW59 222 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 CLDN5O00501 218 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 NRP1O14786 923 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 VAPBO95292 243 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 STAMBPO95630 424 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 AHSGP02765 367 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 GMPRP36959 345 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 CD151P48509 253 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 OLIG2Q13516 323 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 SMAD1Q15797 465 aaKnown RBP18.8■□□□□ 0.6
DDX39A-206ENST00000587730 FAM83EQ2M2I3 478 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 KIAA0930Q6ICG6 404 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-206ENST00000587730 KLC3Q6P597 504 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 HACD2Q6Y1H2 254 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 HFE2Q6ZVN8 426 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 FAM35AQ86V20 835 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 TP53INP2Q8IXH6 220 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 PELI3Q8N2H9 469 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 EFCAB3Q8N7B9 438 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 CALML6Q8TD86 181 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 TRMOQ9BU70 441 aa18.8■□□□□ 0.6
DDX39A-206ENST00000587730 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TCAF2A6NFQ2 919 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 YJEFN3A6XGL0 299 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 CFLARO15519 480 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 FGF10O15520 208 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 PHGDHO43175 533 aaKnown RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 BEST1O76090 585 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TMCC1O94876 653 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SNAI1O95863 264 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SMIM10L2AP0DMW4 78 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SMIM10L2BP0DMW5 78 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SMPD1P17405 629 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TTLL12Q14166 644 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TRIM25Q14258 630 aaKnown RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SNX17Q15036 470 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 LRRC23Q53EV4 343 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 WSCD1Q658N2 575 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 NETO2Q8NC67 525 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 MAML3Q96JK9 1138 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 GPR78Q96P69 363 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 COPS7BQ9H9Q2 264 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TIMMDC1Q9NPL8 285 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 KLK14Q9P0G3 267 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 CDH9Q9ULB4 789 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 GNEQ9Y223 722 aaKnown RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SDHDO14521 159 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 F2P00734 622 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TFAP2AP05549 437 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 RBP1P09455 135 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TPH1P17752 444 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 ATP4BP51164 291 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 SOX4Q06945 474 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 UBXN11Q5T124 520 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 AGAP9Q5VTM2 703 aa18.79■□□□□ 0.6
DDX39A-206ENST00000587730 TIGD7Q6NT04 549 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms