RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 HORMAD1Q86X24 394 aa20.6■□□□□ 0.89
VAT1-203ENST00000587062 VSTM4Q8IW00 320 aa20.6■□□□□ 0.89
VAT1-203ENST00000587062 NIPA2Q8N8Q9 360 aa20.6■□□□□ 0.89
VAT1-203ENST00000587062 ARRDC3Q96B67 414 aa20.6■□□□□ 0.89
VAT1-203ENST00000587062 CTTNBP2NLQ9P2B4 639 aa20.6■□□□□ 0.89
VAT1-203ENST00000587062 ANGPTL2Q9UKU9 493 aa20.6■□□□□ 0.89
VAT1-203ENST00000587062 TLR4O00206 839 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 SH3BP5O60239 455 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 TRIM16O95361 564 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 ADRB3P13945 408 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 AKT2P31751 481 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 CTSKP43235 329 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 PPP2CBP62714 309 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 RPS21P63220 83 aaKnown RBP20.59■□□□□ 0.89
VAT1-203ENST00000587062 PPP2CAP67775 309 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 KIAA1161Q6NSJ0 714 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 GDPD4Q6W3E5 623 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 LEKR1Q6ZMV7 388 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 CNGA4Q8IV77 575 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 ARFGAP1Q8N6T3 406 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 TEKT4Q8WW24 435 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 CCDC42Q96M95 316 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 KCTD15Q96SI1 283 aaPredicted RBP20.59■□□□□ 0.89
VAT1-203ENST00000587062 DNAJC7Q99615 494 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 CDC6Q99741 560 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 ORAI3Q9BRQ5 295 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 TRIM7Q9C029 511 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 NOL6Q9H6R4 1146 aaKnown RBP20.59■□□□□ 0.89
VAT1-203ENST00000587062 UVRAGQ9P2Y5 699 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 CHD5Q8TDI0 1954 aa20.59■□□□□ 0.89
VAT1-203ENST00000587062 CACNA1AO00555 2505 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 A0A1W2PQU0 124 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 GIPC1O14908 333 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 TSPAN6O43657 245 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 AP1G1O43747 822 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 XPAP23025 273 aaPredicted RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 SIM1P81133 766 aaPredicted RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 BNC1Q01954 994 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 SGCGQ13326 291 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 MAPK8IP2Q13387 824 aaPredicted RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 TRIP6Q15654 476 aaKnown RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 DPYSL2Q16555 572 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 CA9Q16790 459 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 ZNF423Q2M1K9 1284 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 ZNF564Q8TBZ8 553 aaPredicted RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 RHBDD1Q8TEB9 315 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 HSPH1Q92598 858 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 PEBP4Q96S96 227 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 ELF4Q99607 663 aaPredicted RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 TRIM5Q9C035 493 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 LRRC19Q9H756 370 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 EBF2Q9HAK2 575 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 SP110Q9HB58 689 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 FNDC3AQ9Y2H6 1198 aaKnown RBP20.58■□□□□ 0.89
VAT1-203ENST00000587062 ACTL7AQ9Y615 435 aa20.58■□□□□ 0.89
VAT1-203ENST00000587062 ASCC3Q8N3C0 2202 aaKnown RBP20.58■□□□□ 0.88
VAT1-203ENST00000587062 DCHS1Q96JQ0 3298 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 C16orf96A6NNT2 1141 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 DFFAO00273 331 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 PCDHGA12O60330 932 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 PALMO75781 387 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 SERPINB6P35237 376 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 PAPOLAP51003 745 aaKnown RBP20.57■□□□□ 0.88
VAT1-203ENST00000587062 SUOXP51687 545 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 TAS2R38P59533 333 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 KRT81Q14533 505 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 RFTN1Q14699 578 aaPredicted RBP20.57■□□□□ 0.88
VAT1-203ENST00000587062 CFAP58Q5T655 872 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 TMCO4Q5TGY1 634 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 TMCO3Q6UWJ1 677 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 TTC7BQ86TV6 843 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 BBS5Q8N3I7 341 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 PAF1Q8N7H5 531 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 NSMCE1Q8WV22 266 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 KLHDC7BQ96G42 594 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 CPEB1Q9BZB8 566 aaKnown RBP20.57■□□□□ 0.88
VAT1-203ENST00000587062 SLC39A8Q9C0K1 460 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 ERVMER34-1Q9H9K5 563 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 IL21RQ9HBE5 538 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 ABHD10Q9NUJ1 306 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 CWC15Q9P013 229 aaKnown RBP20.57■□□□□ 0.88
VAT1-203ENST00000587062 APOBEC2Q9Y235 224 aaKnown RBP20.57■□□□□ 0.88
VAT1-203ENST00000587062 MFHAS1Q9Y4C4 1052 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 SLCO1B1Q9Y6L6 691 aa20.57■□□□□ 0.88
VAT1-203ENST00000587062 C10orf142B7Z368 130 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 SLC31A1O15431 190 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 PRAMEF11O60813 436 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 UGT2B4P06133 528 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 HNRNPA2B1P22626 353 aaKnown RBP20.56■□□□□ 0.88
VAT1-203ENST00000587062 PMLP29590 882 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 GRK6P43250 576 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 RENBPP51606 427 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 SMTNL2Q2TAL5 461 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 KCNT1Q5JUK3 1230 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 MAP7D3Q8IWC1 876 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 OR6K2Q8NGY2 324 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 HCAR2Q8TDS4 363 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 CELF6Q96J87 481 aaKnown RBP20.56■□□□□ 0.88
VAT1-203ENST00000587062 KLHL32Q96NJ5 620 aa20.56■□□□□ 0.88
VAT1-203ENST00000587062 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms